RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MFHAS1Q9Y4C4 1052 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 TULP4Q9NRJ4 1543 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 NOP56O00567 594 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 BRAFP15056 766 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 AXLP30530 894 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 SMARCB1Q12824 385 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 DPH6Q7L8W6 267 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 USP32Q8NFA0 1604 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 COPEO14579 308 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 LSM1O15116 133 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 EXTL3O43909 919 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 GUCY1A2P33402 732 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 COG2Q14746 738 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 MTFR1Q15390 333 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PRELPP51888 382 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF200P98182 395 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 METTL2BQ6P1Q9 378 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PAPOLBQ9NRJ5 636 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 RNPC3Q96LT9 517 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ANKHQ9HCJ1 492 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 IRAK4Q9NWZ3 460 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 NOVA2Q9UNW9 492 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CLUHO75153 1309 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF720Q7Z2F6 126 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 C10orf62Q5T681 223 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PDXDC2PQ6P474 469 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 C3orf62Q6ZUJ4 267 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 SLC22A9Q8IVM8 553 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 SLC39A2Q9NP94 309 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 H3BRJ5 948 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 GLYCTKQ8IVS8 523 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CATSPER2Q96P56 530 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 KCNF1Q9H3M0 494 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 SLC9A2Q9UBY0 812 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 FBXO21O94952 628 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 SCNN1AP37088 669 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 IRGCQ6NXR0 463 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 HES6Q96HZ4 224 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 DDX23Q9BUQ8 820 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 C1orf50Q9BV19 199 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CXorf56Q9H5V9 222 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CTDNEP1O95476 244 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 NPY2RP49146 381 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 TMEM47Q9BQJ4 181 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 TMBIM4Q9HC24 238 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PLK2Q9NYY3 685 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 AP1M2Q9Y6Q5 423 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PEX14O75381 377 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 UNC5CO95185 931 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 NKD2Q969F2 451 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 MASTLQ96GX5 879 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 BTBD10Q9BSF8 475 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ANXA9O76027 345 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CHAMP1Q96JM3 812 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 LSM14BQ9BX40 385 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 EPB41L4AQ9HCS5 686 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ADGBQ8N7X0 1667 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 MST1RQ04912 1400 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CASP5P51878 434 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PDCD7Q8N8D1 485 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PPP2R3CQ969Q6 453 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 KMT5AQ9NQR1 393 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 AMACRQ9UHK6 382 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PRPF4O43172 522 aaKnown RBP eCLIP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CBFA2T3O75081 653 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CRABP2P29373 138 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ELF1P32519 619 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ARHGEF16Q5VV41 709 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ADGRG6Q86SQ4 1221 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CYFIP2Q96F07 1278 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 LHX5Q9H2C1 402 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 UFL1O94874 794 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PPM1KQ8N3J5 372 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 RASGEF1CQ8N431 466 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ZCCHC9Q8N567 271 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 TGFBRAP1Q8WUH2 860 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PENKP01210 267 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CRKLP46109 303 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 DRAP1Q14919 205 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 MAPKAPK5Q8IW41 473 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ERMARDQ5T6L9 678 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 FAM92BQ6ZTR7 304 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 NUDCD3Q8IVD9 361 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PRR36Q9H6K5 1346 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CCDC162PA2VCL2 907 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 IL1BP01584 269 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 RBP1P09455 135 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 CBLBQ13191 982 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 POMGNT1Q8WZA1 660 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 ETNK1Q9HBU6 452 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 RGL1Q9NZL6 768 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 AARS2Q5JTZ9 985 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 PRPF19Q9UMS4 504 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 IFNA14P01570 189 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 BRD2P25440 801 aaKnown RBP5.2□□□□□ -1.58
PCDH9-201ENST00000377861 AGR3Q8TD06 166 aa5.2□□□□□ -1.58
PCDH9-201ENST00000377861 NR5A1Q13285 461 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 LAMC2Q13753 1193 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SELENOSQ9BQE4 189 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms