RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SYN3O14994 580 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 GFRA3O60609 400 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 BMP15O95972 392 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 VARS2Q5ST30 1063 aaKnown RBP22.98■■□□□ 1.27
VSX1-201ENST00000376707 FGF13Q92913 245 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 BICD1Q96G01 975 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 BACH2Q9BYV9 841 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 ODF2LQ9ULJ1 636 aa22.98■■□□□ 1.27
VSX1-201ENST00000376707 H7C4K7 107 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 MEFVO15553 781 aaPredicted RBP22.97■■□□□ 1.27
VSX1-201ENST00000376707 ELF1P32519 619 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 ROR1Q01973 937 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 MCL1Q07820 350 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 SLC10A6Q3KNW5 377 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 PABPC1LQ4VXU2 614 aaKnown RBP22.97■■□□□ 1.27
VSX1-201ENST00000376707 ARSHQ5FYA8 562 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 SLC8B1Q6J4K2 584 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 GPBP1Q86WP2 473 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 CCDC105Q8IYK2 499 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 PIAS4Q8N2W9 510 aaPredicted RBP22.97■■□□□ 1.27
VSX1-201ENST00000376707 RASSF8Q8NHQ8 419 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 ITFG1Q8TB96 612 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 HCFC1R1Q9NWW0 138 aa22.97■■□□□ 1.27
VSX1-201ENST00000376707 CACNA1HO95180 2353 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 MCM4P33991 863 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 NCKAP1LP55160 1127 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 ARPP19P56211 112 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 DHX8Q14562 1220 aaKnown RBP22.96■■□□□ 1.27
VSX1-201ENST00000376707 PARM1Q6UWI2 310 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 MTSS1LQ765P7 747 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 HAUS6Q7Z4H7 955 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 ZNF461Q8TAF7 563 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 FGF14Q92915 247 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 REEP2Q9BRK0 252 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 TBC1D17Q9HA65 648 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 ARHGEF3Q9NR81 526 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 SLC2A4RGQ9NR83 387 aa22.96■■□□□ 1.27
VSX1-201ENST00000376707 DNMT3BQ9UBC3 853 aaKnown RBP22.96■■□□□ 1.27
VSX1-201ENST00000376707 PRRG1O14668 218 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 FAM13AO94988 1023 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 CLTAP09496 248 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 CXCL8P10145 99 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 PDCP20941 246 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 LIG4P49917 911 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 DTWD2Q8NBA8 298 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 DOCK8Q8NF50 2099 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 SUSD3Q96L08 255 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 RPP25Q9BUL9 199 aaKnown RBP22.95■■□□□ 1.26
VSX1-201ENST00000376707 PLEKHA5Q9HAU0 1116 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 TUBGCP4Q9UGJ1 667 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 KCNH3Q9ULD8 1083 aa22.95■■□□□ 1.26
VSX1-201ENST00000376707 WDR27A2RRH5 827 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 PROB1E7EW31 1015 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 LRG1P02750 347 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 KRT18P05783 430 aaKnown RBP22.94■■□□□ 1.26
VSX1-201ENST00000376707 LONP1P36776 959 aaKnown RBP22.94■■□□□ 1.26
VSX1-201ENST00000376707 CTXN3Q4LDR2 81 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 MYCT1Q8N699 235 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 APPL2Q8NEU8 664 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 FBXL5Q9UKA1 691 aa22.94■■□□□ 1.26
VSX1-201ENST00000376707 MRPS23Q9Y3D9 190 aaKnown RBP22.94■■□□□ 1.26
VSX1-201ENST00000376707 TRIP11Q15643 1979 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
VSX1-201ENST00000376707 K7ENM7 598 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 HNRNPDLO14979 420 aaKnown RBP22.93■■□□□ 1.26
VSX1-201ENST00000376707 TBC1D4O60343 1298 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 ABLIM3O94929 683 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 PLCG1P19174 1290 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 SCP2P22307 547 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 NBL1P41271 181 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 SPAG1Q07617 926 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 MRPL58Q14197 206 aaKnown RBP22.93■■□□□ 1.26
VSX1-201ENST00000376707 SF3A1Q15459 793 aaKnown RBP22.93■■□□□ 1.26
VSX1-201ENST00000376707 KYAT1Q16773 422 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 ZNF280DQ6N043 979 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 NPAS3Q8IXF0 933 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 ING5Q8WYH8 240 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 HAPLN2Q9GZV7 340 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 ZHX3Q9H4I2 956 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 PARVGQ9HBI0 331 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 CYP4F11Q9HBI6 524 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 TBX20Q9UMR3 447 aa22.93■■□□□ 1.26
VSX1-201ENST00000376707 ARHGEF37A1IGU5 675 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 RHOP08100 348 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 ATF2P15336 505 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 MARCKSP29966 332 aaPredicted RBP22.92■■□□□ 1.26
VSX1-201ENST00000376707 GPC5P78333 572 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 GRIN1Q05586 938 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 PPP2R3AQ06190 1150 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 MCM6Q14566 821 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 KARSQ15046 597 aaKnown RBP22.92■■□□□ 1.26
VSX1-201ENST00000376707 ANGPT1Q15389 498 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 PHLDB3Q6NSJ2 640 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 LRRC15Q8TF66 581 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 RAD54LQ92698 747 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 KCNN1Q92952 543 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 KIF12Q96FN5 646 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 INTS4Q96HW7 963 aaKnown RBP22.92■■□□□ 1.26
VSX1-201ENST00000376707 BLOC1S4Q9NUP1 217 aa22.92■■□□□ 1.26
VSX1-201ENST00000376707 PCDHB8Q9UN66 801 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms