RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SLC4A1P02730 911 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 OATP04181 439 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 ZNF449Q6P9G9 518 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 FAM83AQ86UY5 434 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 EPS8L3Q8TE67 593 aaKnown RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 MRPL4Q9BYD3 311 aaKnown RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 AIPL1Q9NZN9 384 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 FEZ2Q9UHY8 353 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 H0YCG3 227 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 NFKBIEO00221 500 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 LCP1P13796 627 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 FBXW10Q5XX13 1052 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 ALS2CLQ60I27 953 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 SLFN12LQ6IEE8 588 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 TAOK1Q7L7X3 1001 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 OR5B17Q8NGF7 314 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 ALG3Q92685 438 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 USP54Q70EL1 1684 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 A0A087WZ62 844 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 ZNF862O60290 1169 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 NPTXRO95502 500 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 ARSEP51690 589 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 SESN3P58005 492 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 CCDC91Q7Z6B0 441 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 ARHGEF2Q92974 986 aaKnown RBP11.82□□□□□ -0.52
HDAC6-203ENST00000376619 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-203ENST00000376619 STMN4Q9H169 189 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-203ENST00000376619 TMEM8AQ9HCN3 771 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 DCTN4Q9UJW0 460 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 SYNGAP1Q96PV0 1343 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 TCRBV7S2A1N4TA0A589 114 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 PPFIA4O75335 1185 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 RPSAP08865 295 aaKnown RBP11.82□□□□□ -0.52
HDAC6-203ENST00000376619 SLC8A3P57103 927 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 TBC1D1Q86TI0 1168 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-203ENST00000376619 ATP8B4Q8TF62 1192 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 TTYH3Q9C0H2 523 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 RASA4BC9J798 803 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 RASA4O43374 803 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 CREB3O43889 395 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 TMEM253P0C7T8 217 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 ZSCAN5DPP0CG00 497 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 GUCY2CP25092 1073 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 NME3Q13232 169 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 TTLL4Q14679 1199 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 MOXD1Q6UVY6 613 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 HOMER3Q9NSC5 361 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 COMMD10Q9Y6G5 202 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 B4GALT5O43286 388 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 KRT3P12035 628 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 GTF2A1P52655 376 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-203ENST00000376619 CDH6P55285 790 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 CUL1Q13616 776 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 P3H1Q32P28 736 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 MMGT1Q8N4V1 131 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 SPATC1LQ9H0A9 340 aa11.82□□□□□ -0.52
HDAC6-203ENST00000376619 CNTRLQ7Z7A1 2325 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 PRPSAP2O60256 369 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 CAND2O75155 1236 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 BRAFP15056 766 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ALCAMQ13740 583 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 HIBCHQ6NVY1 386 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ASAP3Q8TDY4 903 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 AGAP3Q96P47 875 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 POLIQ9UNA4 740 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 TOGARAM1Q9Y4F4 1720 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 HOXD13P35453 343 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 CCNA1P78396 465 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 PDIA2Q13087 525 aaKnown RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 DAW1Q8N136 415 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 PYROXD1Q8WU10 500 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ERP44Q9BS26 406 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 OSBPL8Q9BZF1 889 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 PIN4Q9Y237 131 aaKnown RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ZNF541Q9H0D2 1346 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 TARSL2A2RTX5 802 aaKnown RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 A8MXQ7 604 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 MIF4GDA9UHW6 222 aaKnown RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 SUPT20HL2P0C7V6 817 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 P4HA1P13674 534 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 DSG3P32926 999 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ACTN3Q08043 901 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 SPIRE1Q08AE8 756 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ZCWPW2Q504Y3 356 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 ATF7IP2Q5U623 682 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 NT5DC3Q86UY8 548 aa11.81□□□□□ -0.52
HDAC6-203ENST00000376619 PRMT1Q99873 361 aaKnown RBP11.81□□□□□ -0.52
HDAC6-203ENST00000376619 CYP39A1Q9NYL5 469 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms