RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GTF3C4Q9UKN8 822 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ARL2BPQ9Y2Y0 163 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PPFIA2O75334 1257 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 VCAM1P19320 739 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PAX7P23759 505 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 BRD2P25440 801 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PSMA2P25787 234 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ECHS1P30084 290 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 HSPA1LP34931 641 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ELF3P78545 371 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CDR2Q01850 454 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SPARCL1Q14515 664 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RHOT1Q8IXI2 618 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 AGO2Q9UKV8 859 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NOP56O00567 594 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MARSP56192 900 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PPP6R3Q5H9R7 873 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 HYIQ5T013 277 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CFAP61Q8NHU2 1237 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PARP4Q9UKK3 1724 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CDH16O75309 829 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CBX6O95503 412 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ERICH1Q86X53 443 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GPD1LQ8N335 351 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 EMC1Q8N766 993 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 AGAP11Q8TF27 550 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NUDCD1Q96RS6 583 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TRAIPQ9BWF2 469 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MRPL47Q9HD33 250 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ZNF70Q9UC06 446 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PHRF1Q9P1Y6 1649 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ARHGAP42A6NI28 874 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TXNDC9O14530 226 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PEX10O60683 326 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 INHBAP08476 426 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ADRA2BP18089 450 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SAT1P21673 171 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FMO1Q01740 532 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CNGA2Q16280 664 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GNPTABQ3T906 1256 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ACAD10Q6JQN1 1059 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CCDC62Q6P9F0 684 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 C1orf131Q8NDD1 294 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ATG4CQ96DT6 458 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NGRNQ9NPE2 291 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CHMP2BQ9UQN3 213 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ALS2Q96Q42 1657 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MT-ND3P03897 115 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ATP2A2P16615 1042 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 JAM2P57087 298 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SIAH1Q8IUQ4 282 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PPM1NQ8N819 430 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PDCD7Q8N8D1 485 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KCTD6Q8NC69 237 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RBBP8NLQ8NC74 664 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LRP6O75581 1613 aa15.24■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CCDC160A6NGH7 325 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 H0YGN5 161 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TTC4O95801 387 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NQO1P15559 274 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 HMGCS2P54868 508 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ZNF572Q7Z3I7 529 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TTLL3Q9Y4R7 772 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PCDHA10Q9Y5I2 948 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NFS1Q9Y697 457 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KRT4P19013 534 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ITIH2P19823 946 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SSTR1P30872 391 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LRRC36Q1X8D7 754 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 DARS2Q6PI48 645 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ZDHHC24Q6UX98 284 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FAM160B2Q86V87 743 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PARD3BQ8TEW8 1205 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SHCBP1LQ9BZQ2 653 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PRM3Q9NNZ6 103 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 COL4A1P02462 1669 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CYP3A7-CYP3A51PA0A087WV96 503 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CYP3A7P24462 503 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GTF2H1P32780 548 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 BPIFB4P59827 614 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 COPS2P61201 443 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PKN2Q16513 984 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 C1orf228Q6PIY5 440 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LVRNQ6Q4G3 990 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CENPUQ71F23 418 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 C7orf31Q8N865 590 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GMCL1Q96IK5 515 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FHDC1Q9C0D6 1143 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NINJ2Q9NZG7 142 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SUGT1Q9Y2Z0 365 aa15.23■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RPTORQ8N122 1335 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms