RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TEX33O43247 280 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SLC34A1Q06495 639 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 DACH2Q96NX9 599 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 MSTO1Q9BUK6 570 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 BRD8Q9H0E9 1235 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 COPG2Q9UBF2 871 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF711Q9Y462 761 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SUPT3HO75486 399 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 MCAMP43121 646 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SERPINB8P50452 374 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 EIF6P56537 245 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 GOLGA8FQ08AF8 430 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 GOLGA8DPQ0D2H9 430 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF184Q99676 751 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 INTS2Q9H0H0 1204 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 A1BGP04217 495 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 PSMA3P25788 255 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 FMO5P49326 533 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 EFHC2Q5JST6 749 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 HNRNPCL2B2RXH8 293 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 XPO1O14980 1071 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 RAD51CO43502 376 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 ATAD3BQ5T9A4 648 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 LRRC8EQ6NSJ5 796 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SMYD3Q9H7B4 428 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 TAGLN3Q9UI15 199 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 BTNL10A8MVZ5 291 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 WDR47O94967 919 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 KRT20P35900 424 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CYP4A11Q02928 519 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 TTC33Q6PID6 262 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 E2F7Q96AV8 911 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ASCC2Q9H1I8 757 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 TIMM44O43615 452 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 GLRA3O75311 464 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ADAMTS2O95450 1211 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 SCUBE1Q8IWY4 988 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CMTR1Q8N1G2 835 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 SHOC2Q9UQ13 582 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 GAS2O43903 313 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 GSNP06396 782 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 TSHRP16473 764 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CDK7P50613 346 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 EPHB1P54762 984 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 SLC29A2Q14542 456 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF699Q32M78 642 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 AADATQ8N5Z0 425 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 VCPIP1Q96JH7 1222 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 DDX28Q9NUL7 540 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 VPS37AQ8NEZ2 397 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 MRPS26Q9BYN8 205 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 PKD2L1Q9P0L9 805 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 METP08581 1390 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CYP2C8P10632 490 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 DRG2P55039 364 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 TRAPPC3O43617 180 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF18P17022 549 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 HOXB8P17481 243 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ACAT1P24752 427 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 MAEAQ7L5Y9 396 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 LUZP2Q86TE4 346 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 PAGR1Q9BTK6 254 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 AGXT2Q9BYV1 514 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 PRRG3Q9BZD7 231 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF556Q9HAH1 456 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 SRP72O76094 671 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ASNSP08243 561 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CASP2P42575 452 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 QARSP47897 775 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 PSMC1P62191 440 aaKnown RBP10.69□□□□□ -0.7
PTCH1-204ENST00000375290 BARGINQ6ZT62 677 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 CLMNQ96JQ2 1002 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 ZSWIM1Q9BR11 485 aa10.69□□□□□ -0.7
PTCH1-204ENST00000375290 FXR1P51114 621 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 LVRNQ6Q4G3 990 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 LRRC47Q8N1G4 583 aaKnown RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 TPCN2Q8NHX9 752 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 DMAP1Q9NPF5 467 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 CDV3Q9UKY7 258 aaKnown RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 TTC7AQ9ULT0 858 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 TP53BP2Q13625 1128 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 TTC27Q6P3X3 843 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 DNAJC10Q8IXB1 793 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 FUKQ8N0W3 1084 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 ASB2Q96Q27 587 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 C1orf50Q9BV19 199 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 HMG20AQ9NP66 347 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 UBA2Q9UBT2 640 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 VTI1BQ9UEU0 232 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 PPME1Q9Y570 386 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 H3BNX3 289 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 GALCP54803 685 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 RCN1Q15293 331 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms