RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 HBP1O60381 514 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 LRRN2O75325 713 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 STBD1O95210 358 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 TMEM253P0C7T8 217 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 HOXC8P31273 242 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 ADAM17P78536 824 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 PAK2Q13177 524 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 TAF3Q5VWG9 929 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 IFT81Q8WYA0 676 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 WNT8BQ93098 351 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 UBE2TQ9NPD8 197 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-202ENST00000374876 GPRC5CQ9NQ84 441 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 ANKEF1Q9NU02 776 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 SUCLA2Q9P2R7 463 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-202ENST00000374876 PRKAG2Q9UGJ0 569 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 ZBTB42B2RXF5 422 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 H0YGN5 161 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 AGPSO00116 658 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
CCDC40-202ENST00000374876 FOXN3O00409 490 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-202ENST00000374876 OATP04181 439 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 GCLMP48507 274 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 NNTQ13423 1086 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 KLHL7Q8IXQ5 586 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 OLIG1Q8TAK6 271 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 RFFLQ8WZ73 363 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 SYT11Q9BT88 431 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 NRBP2Q9NSY0 501 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 TMEM59LQ9UK28 342 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 TBX21Q9UL17 535 aa16.7■□□□□ 0.26
CCDC40-202ENST00000374876 NCANO14594 1321 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 GNAT1P11488 350 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 ABCB4P21439 1286 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 CARSP49589 748 aaKnown RBP16.69■□□□□ 0.26
CCDC40-202ENST00000374876 SMTNP53814 917 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 NCKAP1LP55160 1127 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 ANO5Q75V66 913 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 DHX38Q92620 1227 aaKnown RBP16.69■□□□□ 0.26
CCDC40-202ENST00000374876 PKNOX2Q96KN3 472 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 PLEKHA4Q9H4M7 779 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 SEPT9Q9UHD8 586 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-202ENST00000374876 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 CEP290O15078 2479 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 ESYT3A0FGR9 886 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 ZSCAN5CA6NGD5 496 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-202ENST00000374876 CCDC169A6NNP5 214 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 MAPK13O15264 365 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 RAG1P15918 1043 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 CYP2C18P33260 490 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 XKR3Q5GH77 459 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 LEKR1Q6ZMV7 388 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 RUFY4Q6ZNE9 571 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 NT5DC3Q86UY8 548 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 RUFY1Q96T51 708 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCDC40-202ENST00000374876 HIPK3Q9H422 1215 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 AMFRQ9UKV5 643 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 STXBP5LQ9Y2K9 1186 aa16.69■□□□□ 0.26
CCDC40-202ENST00000374876 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 RAD51CO43502 376 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 HSF2BPO75031 334 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 DMP1Q13316 513 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-202ENST00000374876 MTERF2Q49AM1 385 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 EPC2Q52LR7 807 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 ZNF484Q5JVG2 852 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 MTHFD1LQ6UB35 978 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 SERINC5Q86VE9 423 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 CALR3Q96L12 384 aaKnown RBP16.68■□□□□ 0.26
CCDC40-202ENST00000374876 AGPAT1Q99943 283 aa16.68■□□□□ 0.26
CCDC40-202ENST00000374876 NOC2LQ9Y3T9 749 aaKnown RBP16.68■□□□□ 0.26
CCDC40-202ENST00000374876 TULP1O00294 542 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-202ENST00000374876 OPA1O60313 960 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 BUB1BO60566 1050 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-202ENST00000374876 ACTN2P35609 894 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 MXI1P50539 228 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 CCL23P55773 120 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
CCDC40-202ENST00000374876 PTK7Q13308 1070 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 ZSCAN26Q16670 478 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 OTUD6AQ7L8S5 288 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 ARHGEF19Q8IW93 802 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 BADQ92934 168 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 HES6Q96HZ4 224 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 TBX20Q9UMR3 447 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 MBLAC1A4D2B0 266 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-202ENST00000374876 ANKRD62A6NC57 917 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 GOLGA6CA6NDK9 693 aa16.67■□□□□ 0.26
CCDC40-202ENST00000374876 KRIT1O00522 736 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms