RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CHST7Q9NS84 486 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 A0A1B0GUA9 196 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 GSTTP1A0A1W2PQM5 241 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 TCP11X1B4DZS4 312 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 DGAT1O75907 488 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 BRAFP15056 766 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 RRM1P23921 792 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 STX2P32856 288 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 RTP1P59025 263 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 ELF3P78545 371 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 STAT4Q14765 748 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 LLGL1Q15334 1064 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 CCNG2Q16589 344 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 PPP1R21Q6ZMI0 780 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 CPNE8Q86YQ8 564 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 TAAR1Q96RJ0 339 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 KIFC3Q9BVG8 833 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 SLC38A10Q9HBR0 1119 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 RAVER2Q9HCJ3 691 aaKnown RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 TOPORSQ9NS56 1045 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 SCINQ9Y6U3 715 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 PROSCO94903 275 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 STRN3Q13033 797 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 LRRC14Q15048 493 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 KYNUQ16719 465 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ANO5Q75V66 913 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 RELL1Q8IUW5 271 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 RIBC1Q8N443 379 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-204ENST00000374346 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 GRAMD1AQ96CP6 724 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 VCPIP1Q96JH7 1222 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 FAM213AQ9BRX8 229 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 PXMP2Q9NR77 195 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ACTL7BQ9Y614 415 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ZBED4O75132 1171 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 RAD17O75943 681 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ATP6V1G2O95670 118 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 FDX1P10109 184 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 TNNI1P19237 187 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 IVDP26440 423 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 CHKAP35790 457 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 NR1H3Q13133 447 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 RIPK1Q13546 671 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 TRIP13Q15645 432 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-204ENST00000374346 CRELD2Q6UXH1 353 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-204ENST00000374346 GPATCH11Q8N954 259 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 CKAP2Q8WWK9 683 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
PTPN20-204ENST00000374346 SENP7Q9BQF6 1050 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 FGFR1OP2Q9NVK5 253 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 ADGRA3Q8IWK6 1321 aa12.14□□□□□ -0.47
PTPN20-204ENST00000374346 NDC80O14777 642 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 TP73O15350 636 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 EXTL3O43909 919 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 ATP9AO75110 1047 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 APBA3O96018 575 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 CCNE2O96020 404 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 OAS1P00973 400 aaKnown RBP12.13□□□□□ -0.47
PTPN20-204ENST00000374346 RALAP11233 206 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 CCND2P30279 289 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 LIG4P49917 911 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 SPATA21Q7Z572 469 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-204ENST00000374346 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 MAGEB18Q96M61 343 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 KLHL14Q9P2G3 628 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 BAIAP2L1Q9UHR4 511 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 LGALS13Q9UHV8 139 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 WDR81Q562E7 1941 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-204ENST00000374346 PSAPP07602 524 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 CLTAP09496 248 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 SSR1P43307 286 aaKnown RBP12.13□□□□□ -0.47
PTPN20-204ENST00000374346 SLC39A4Q6P5W5 647 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 MTMR14Q8NCE2 650 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 CFAP57Q96MR6 1250 aa12.13□□□□□ -0.47
PTPN20-204ENST00000374346 TGS1Q96RS0 853 aaKnown RBP12.13□□□□□ -0.47
PTPN20-204ENST00000374346 OSBPL8Q9BZF1 889 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms