RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CLCN3P51790 818 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 NNTQ13423 1086 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 NCOA4Q13772 614 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 CLUL1Q15846 466 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 GJC2Q5T442 439 aaPredicted RBP13.48□□□□□ -0.25
PRPF4-202ENST00000374199 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 RHPN2Q8IUC4 686 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 ACP6Q9NPH0 428 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 UMODL1Q5DID0 1318 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 H3BRB1 525 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
PRPF4-202ENST00000374199 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 TUT1Q9H6E5 874 aaKnown RBP13.48□□□□□ -0.25
PRPF4-202ENST00000374199 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 SIX4Q9UIU6 781 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 PACSIN2Q9UNF0 486 aaPredicted RBP13.48□□□□□ -0.25
PRPF4-202ENST00000374199 TRPC6Q9Y210 931 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 THSD7BQ9C0I4 1608 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 GPR25O00155 361 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 TSPAN1O60635 241 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 GJB1P08034 283 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 MYBL2P10244 700 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 ECHS1P30084 290 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 INHBEP58166 350 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 NOMO3P69849 1222 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 DGKDQ16760 1214 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 NT5DC4Q86YG4 428 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 MCOLN2Q8IZK6 566 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 HDAC7Q8WUI4 952 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 STIM2Q9P246 746 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 IVNS1ABPQ9Y6Y0 642 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 MROH7Q68CQ1 1323 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 CCDC188H7C350 402 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 GRIK4Q16099 956 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 CYP1B1Q16678 543 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 WDR44Q5JSH3 913 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 TRIM11Q96F44 468 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 ASB7Q9H672 318 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
PRPF4-202ENST00000374199 ERLIN1O75477 346 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 LSM8O95777 96 aaKnown RBP13.47□□□□□ -0.25
PRPF4-202ENST00000374199 ZNF286BP0CG31 522 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 FAM193AP78312 1265 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 DUOXA2Q1HG44 320 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 SGSM1Q2NKQ1 1148 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 PEX26Q7Z412 305 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 MREGQ8N565 214 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 ALG3Q92685 438 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 SLC5A4Q9NY91 659 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 DERAQ9Y315 318 aa13.47□□□□□ -0.25
PRPF4-202ENST00000374199 SMIM35A0A1B0GVV1 85 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 PGRMC1O00264 195 aaKnown RBP13.46□□□□□ -0.25
PRPF4-202ENST00000374199 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 TNNI1P19237 187 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 PAFAH1B1P43034 410 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 SPOPLQ6IQ16 392 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 PLEKHA7Q6IQ23 1121 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 ZSWIM1Q9BR11 485 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 GOLPH3Q9H4A6 298 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRPF4-202ENST00000374199 PCDHA3Q9Y5H8 950 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 ALG6Q9Y672 507 aa13.46□□□□□ -0.25
PRPF4-202ENST00000374199 MAN1A1P33908 653 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 TM4SF4P48230 202 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.26
PRPF4-202ENST00000374199 HIC1Q14526 733 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 PPP1R15BQ5SWA1 713 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 LMBRD2Q68DH5 695 aaPredicted RBP13.46□□□□□ -0.26
PRPF4-202ENST00000374199 HDXQ7Z353 690 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 C12orf50Q8NA57 414 aaPredicted RBP13.46□□□□□ -0.26
PRPF4-202ENST00000374199 ZBTB10Q96DT7 871 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 SUGCTQ9HAC7 445 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.26
PRPF4-202ENST00000374199 C2CD2Q9Y426 696 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 FRMPD3Q5JV73 1810 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 NRCAMQ92823 1304 aa13.46□□□□□ -0.26
PRPF4-202ENST00000374199 TULP1O00294 542 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-202ENST00000374199 ATICP31939 592 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 SIX1Q15475 284 aaPredicted RBP13.45□□□□□ -0.26
PRPF4-202ENST00000374199 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
PRPF4-202ENST00000374199 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms