RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SIX6OS1Q8N1H7 587 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 ATP8B4Q8TF62 1192 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 JPH1Q9HDC5 661 aaPredicted RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 TRAF3IP3Q9Y228 551 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 PFDN1O60925 122 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 NQO1P15559 274 aaKnown RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 THOC5Q13769 683 aaKnown RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 EPC2Q52LR7 807 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 JADE1Q6IE81 842 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 C1orf228Q6PIY5 440 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 OR6B3Q8NGW1 331 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 VPS11Q9H270 941 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 WHRNQ9P202 907 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 REXO2Q9Y3B8 237 aaKnown RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 PCDHGC5Q9Y5F6 944 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 DCCP43146 1447 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 TNFAIP2Q03169 654 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 RFX8Q6ZV50 586 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 TTLL6Q8N841 843 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 C2orf40Q9H1Z8 148 aa18.39■□□□□ 0.53
PTPRU-202ENST00000373779 RANBP17Q9H2T7 1088 aaKnown RBP18.39■□□□□ 0.53
PTPRU-202ENST00000373779 PIGHQ14442 188 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-202ENST00000373779 CDKL3Q8IVW4 592 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-202ENST00000373779 CCDC117Q8IWD4 279 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-202ENST00000373779 HLA-DRAP01903 254 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 PI4K2AQ9BTU6 479 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 KPNA7A9QM74 516 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 SUPT20HL1Q3ZLR7 823 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 LVRNQ6Q4G3 990 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 FDX1P10109 184 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 VEGFAP15692 232 aaPredicted RBP18.38■□□□□ 0.53
PTPRU-202ENST00000373779 OSBPP22059 807 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 NACA2Q9H009 215 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 CCDC68Q9H2F9 335 aa18.38■□□□□ 0.53
PTPRU-202ENST00000373779 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 MCUQ8NE86 351 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 CDC42EP4Q9H3Q1 356 aaKnown RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 KCNH7Q9NS40 1196 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 PSMC6P62333 389 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 NCOA4Q13772 614 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 TAF1BQ53T94 588 aaPredicted RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 HEATR6Q6AI08 1181 aaKnown RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 KRT80Q6KB66 452 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 RNF169Q8NCN4 708 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 ATG4AQ8WYN0 398 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 MTMR9Q96QG7 549 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 TRIM56Q9BRZ2 755 aaKnown RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 XPO7Q9UIA9 1087 aaKnown RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 BCL9O00512 1426 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 ASAP2O43150 1006 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 CIITAP33076 1130 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 DNAJC3Q13217 504 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 RAB44Q7Z6P3 723 aaPredicted RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 SLC20A1Q8WUM9 679 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 OLFML3Q9NRN5 406 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 RNF225M0QZC1 329 aaPredicted RBP18.37■□□□□ 0.53
PTPRU-202ENST00000373779 WNT7AO00755 349 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 GHRP10912 638 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 GZMAP12544 262 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 MUTP22033 750 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 CA8P35219 290 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 C11orf63Q6NUN7 778 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 KCNK18Q7Z418 384 aa18.37■□□□□ 0.53
PTPRU-202ENST00000373779 EPHB6O15197 1021 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 ESRRGP62508 458 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 TEX9Q8N6V9 391 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 ENO1P06733 434 aaKnown RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 SLC20A2Q08357 652 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 SPP2Q13103 211 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 PDE1CQ14123 709 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 ZNF720Q7Z2F6 126 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 SULF1Q8IWU6 871 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 DCLK2Q8N568 766 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 MAGEB18Q96M61 343 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 HSD3B7Q9H2F3 369 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 HOXC10Q9NYD6 342 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 KLHL8Q9P2G9 620 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 LRRC23Q53EV4 343 aaPredicted RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 CNGA1P29973 690 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 XKR3Q5GH77 459 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 LRP10Q7Z4F1 713 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 NT5DC3Q86UY8 548 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 DTX3LQ8TDB6 740 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 SLC5A4Q9NY91 659 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 CNOT7Q9UIV1 285 aaKnown RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 PHKA2P46019 1235 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 ARMCX2Q7L311 632 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 EIF1ADQ8N9N8 165 aaKnown RBP18.36■□□□□ 0.53
PTPRU-202ENST00000373779 TBX20Q9UMR3 447 aa18.36■□□□□ 0.53
PTPRU-202ENST00000373779 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 APOL1O14791 398 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 PSTPIP1O43586 416 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 KLC1Q07866 573 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 CD302Q8IX05 232 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
PTPRU-202ENST00000373779 DCPSQ96C86 337 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms