RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 GPC3P51654 580 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SLC12A3P55017 1021 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SKIV2LQ15477 1246 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 NAB2Q15742 525 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SLC15A2Q16348 729 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 CEP78Q5JTW2 689 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 BTNL9Q6UXG8 535 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SMIM5Q71RC9 77 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 CARNMT1Q8N4J0 409 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 KIFAP3Q92845 792 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 CCDC43Q96MW1 224 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 PSMB7Q99436 277 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 B3GNT4Q9C0J1 378 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 DDX4Q9NQI0 724 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SCHIP1Q9P0W5 487 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 RABGAP1Q9Y3P9 1069 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 ADAMTSL1Q8N6G6 1762 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 LOC105371267A0A1B0GV96 52 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 TLDC2A0PJX2 215 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 LRRC72A6NJI9 287 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 HEXIM1O94992 359 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 ANP32DO95626 131 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 PLA2G4BP0C869 781 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 PORP16435 677 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 RPA1P27694 616 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 BLVRAP53004 296 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SPIRE1Q08AE8 756 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 PDCLQ13371 301 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 E2F2Q14209 437 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SLC18A3Q16572 532 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 TDRD12Q587J7 1177 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 APOBEC3HQ6NTF7 200 aaKnown RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 KCNK18Q7Z418 384 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 ETNPPLQ8TBG4 499 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 IPCEF1Q8WWN9 437 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SIKE1Q9BRV8 207 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 CPVLQ9H3G5 476 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SERHL2Q9H4I8 314 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 VAT1LQ9HCJ6 419 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 GGA2Q9UJY4 613 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 INTUQ9ULD6 942 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SLC4A7Q9Y6M7 1214 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 IVNS1ABPQ9Y6Y0 642 aa8.73□□□□□ -1.01
GARNL3-201ENST00000373386 SPDYE16A6NNV3 312 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 PDXKO00764 312 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 S100A6P06703 90 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 SREBF1P36956 1147 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 STAT3P40763 770 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 PRKCIP41743 596 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 SLC1A4P43007 532 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 GTF2IP78347 998 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 GFPT1Q06210 699 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 ITGB3BPQ13352 177 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 ECM1Q16610 540 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 RNF187Q5TA31 235 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 CDC42EP5Q6NZY7 148 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 IQCKQ8N0W5 287 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 LRRC47Q8N1G4 583 aaKnown RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 CERS5Q8N5B7 392 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 DIS3LQ8TF46 1054 aaKnown RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 NUDT12Q9BQG2 462 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 NOD2Q9HC29 1040 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 USP40Q9NVE5 1235 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 SMARCAL1Q9NZC9 954 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 EHD2Q9NZN4 543 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 SALL4Q9UJQ4 1053 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 RXRBP28702 533 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 HPDP32754 393 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 IFI16Q16666 785 aaKnown RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 FAM83BQ5T0W9 1011 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 TUBA3EQ6PEY2 450 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 AADATQ8N5Z0 425 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 SCFD1Q8WVM8 642 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 FAM167BQ9BTA0 163 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 ANO3Q9BYT9 981 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 ZC3H12CQ9C0D7 883 aaKnown RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 EPN3Q9H201 632 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 GANQ9H2C0 597 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 EPB41L5Q9HCM4 733 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 PI4KBQ9UBF8 816 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 NFU1Q9UMS0 254 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 NENFQ9UMX5 172 aa8.72□□□□□ -1.01
GARNL3-201ENST00000373386 FAM32AQ9Y421 112 aaKnown RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 RBBP6Q7Z6E9 1792 aaKnown RBP8.72□□□□□ -1.01
GARNL3-201ENST00000373386 A0A0A6YYK5 440 aaPredicted RBP8.71□□□□□ -1.01
GARNL3-201ENST00000373386 C6orf229H3BNL8 230 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 HAT1O14929 419 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 CETN3O15182 167 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 NKRFO15226 690 aaKnown RBP eCLIP8.71□□□□□ -1.01
GARNL3-201ENST00000373386 BUB1O43683 1085 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 ATP6V1G2O95670 118 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 NR1D1P20393 614 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 TMOD1P28289 359 aa8.71□□□□□ -1.01
GARNL3-201ENST00000373386 TNNC1P63316 161 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms