RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PCDHB2Q9Y5E7 798 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 GSTTP1A0A1W2PQM5 241 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 HSPA6P17066 643 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 MAGEA9P43362 315 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 PWWP2AQ96N64 755 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 ARL2P36404 184 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 SF3A3Q12874 501 aaKnown RBP eCLIP25.43■■□□□ 1.661e-9■■■■□ 19.8
CDK9-201ENST00000373264 SGO2Q562F6 1265 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 DENND2CQ68D51 928 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 ZBTB33Q86T24 672 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 PRUNE1Q86TP1 453 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 TMEM130Q8N3G9 435 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 MORC4Q8TE76 937 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 AZI2Q9H6S1 392 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 KLHL11Q9NVR0 708 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 HOXC10Q9NYD6 342 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 MTUS1Q9ULD2 1270 aa25.43■■□□□ 1.66
CDK9-201ENST00000373264 MARK3P27448 753 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 TAS2R40P59535 323 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 CUL2Q13617 745 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 CAPSQ13938 189 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 PPP1R7Q15435 360 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 MON1BQ7L1V2 547 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 TRIM50Q86XT4 487 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 RAPGEF5Q92565 580 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 ZBTB10Q96DT7 871 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 DDX23Q9BUQ8 820 aaKnown RBP25.42■■□□□ 1.66
CDK9-201ENST00000373264 STYXL1Q9Y6J8 313 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 ERLIN2O94905 339 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 ATG7O95352 703 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 CYP1A1P04798 512 aaPredicted RBP25.42■■□□□ 1.66
CDK9-201ENST00000373264 NSFP46459 744 aaKnown RBP25.42■■□□□ 1.66
CDK9-201ENST00000373264 VPS41P49754 854 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 KRT17Q04695 432 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 PACS2Q86VP3 889 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 SLC7A3Q8WY07 619 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 TLCD1Q96CP7 247 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 USTQ9Y2C2 406 aa25.42■■□□□ 1.66
CDK9-201ENST00000373264 PODXLO00592 558 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 FSCN2O14926 492 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 GGPS1O95749 300 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 CST3P01034 146 aaPredicted RBP25.41■■□□□ 1.66
CDK9-201ENST00000373264 TCF4P15884 667 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 ALDH5A1P51649 535 aaPredicted RBP25.41■■□□□ 1.66
CDK9-201ENST00000373264 MMS22LQ6ZRQ5 1243 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 APOBEC3FQ8IUX4 373 aaKnown RBP25.41■■□□□ 1.66
CDK9-201ENST00000373264 ART4Q93070 314 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 DDX27Q96GQ7 796 aaKnown RBP25.41■■□□□ 1.66
CDK9-201ENST00000373264 CNTNAP2Q9UHC6 1331 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 FOXO6A8MYZ6 492 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 USP2O75604 605 aaPredicted RBP25.41■■□□□ 1.66
CDK9-201ENST00000373264 CHKAP35790 457 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 VGLL4Q14135 290 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 CLUL1Q15846 466 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 LY6KQ17RY6 165 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 ENOSF1Q7L5Y1 443 aa25.41■■□□□ 1.66
CDK9-201ENST00000373264 A0A0B4J269 797 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 SOWAHBA6NEL2 793 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 A6NNZ2 444 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 ZC3H11AO75152 810 aaKnown RBP eCLIP25.4■■□□□ 1.663e-11■■■□□ 18
CDK9-201ENST00000373264 FARP2O94887 1054 aaPredicted RBP25.4■■□□□ 1.66
CDK9-201ENST00000373264 ECEL1O95672 775 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 NUDT17P0C025 328 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 GNA15P30679 374 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 NAMPTP43490 491 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 TUBB8Q3ZCM7 444 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 ARFGAP2Q8N6H7 521 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 FAM212AQ96EL1 285 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 LRRC19Q9H756 370 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 AAASQ9NRG9 546 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 TMEM51Q9NW97 253 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 FAM107AO95990 144 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 NOP14P78316 857 aaKnown RBP25.4■■□□□ 1.66
CDK9-201ENST00000373264 CENPCQ03188 943 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 ATP13A4Q4VNC1 1196 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 CCDC38Q502W7 563 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 NLGN2Q8NFZ4 835 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.4■■□□□ 1.66
CDK9-201ENST00000373264 SNCAIPQ9Y6H5 919 aa25.4■■□□□ 1.66
CDK9-201ENST00000373264 TRAPPC3O43617 180 aa25.39■■□□□ 1.66
CDK9-201ENST00000373264 NOMO3P69849 1222 aa25.39■■□□□ 1.66
CDK9-201ENST00000373264 ZNF394Q53GI3 561 aa25.39■■□□□ 1.66
CDK9-201ENST00000373264 CCDC50Q8IVM0 306 aa25.39■■□□□ 1.66
CDK9-201ENST00000373264 MICALL1Q8N3F8 863 aa25.39■■□□□ 1.66
CDK9-201ENST00000373264 RBBP8NLQ8NC74 664 aaPredicted RBP25.39■■□□□ 1.66
CDK9-201ENST00000373264 ADGRA2Q96PE1 1338 aa25.39■■□□□ 1.66
CDK9-201ENST00000373264 RIPK2O43353 540 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 RALAP11233 206 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 CD58P19256 250 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 TMEM63BQ5T3F8 832 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 C12orf50Q8NA57 414 aaPredicted RBP25.39■■□□□ 1.65
CDK9-201ENST00000373264 PRPF31Q8WWY3 499 aaKnown RBP25.39■■□□□ 1.65
CDK9-201ENST00000373264 GPRC5DQ9NZD1 345 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 ADAM22Q9P0K1 906 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 PASKQ96RG2 1323 aa25.39■■□□□ 1.65
CDK9-201ENST00000373264 GMNCA6NCL1 334 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 THAP12O43422 761 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 GJB1P08034 283 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 CLTAP09496 248 aa25.38■■□□□ 1.65
CDK9-201ENST00000373264 SSR1P43307 286 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms