RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 CHMP6Q96FZ7 201 aa13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 SEC16BQ96JE7 1060 aa13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 ROPN1BQ9BZX4 212 aaPredicted RBP13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 HAPLN2Q9GZV7 340 aa13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 ROPN1Q9HAT0 212 aaPredicted RBP13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
TSPAN6-201ENST00000373020 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 NFKBIEO00221 500 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 PROSCO94903 275 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ATG7O95352 703 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ATP4AP20648 1035 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 IFI35P80217 286 aaPredicted RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ACTN3Q08043 901 aaPredicted RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CALCOCO2Q13137 446 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 AUHQ13825 339 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 PPP1R7Q15435 360 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 GNPTABQ3T906 1256 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 C1orf54Q8WWF1 131 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 DCLK3Q9C098 648 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 STMN4Q9H169 189 aaPredicted RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 PORCNQ9H237 461 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 DHX33Q9H6R0 707 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CHST7Q9NS84 486 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 PIM2Q9P1W9 311 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CAPN7Q9Y6W3 813 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 PSTPIP1O43586 416 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ITIH2P19823 946 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ICAM3P32942 547 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 PIK3CAP42336 1068 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 NAMPTP43490 491 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 NOMO3P69849 1222 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CUL2Q13617 745 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 MTERF2Q49AM1 385 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 WDR44Q5JSH3 913 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 LMBRD2Q68DH5 695 aaPredicted RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 ASAP3Q8TDY4 903 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CPA5Q8WXQ8 436 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 SNF8Q96H20 258 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 APOBEC3GQ9HC16 384 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 AGO2Q9UKV8 859 aaKnown RBP13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 NEU2Q9Y3R4 380 aa13.39□□□□□ -0.27
TSPAN6-201ENST00000373020 RASGRF2O14827 1237 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 GLRA2P23416 452 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 ARL2P36404 184 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 HMGCS2P54868 508 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 KCNV1Q6PIU1 500 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 CGRRF1Q99675 332 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 ADGRA2Q96PE1 1338 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 ZNF541Q9H0D2 1346 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 A0A0G2JMZ2 1700 aa13.38□□□□□ -0.27
TSPAN6-201ENST00000373020 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 SORBS3O60504 671 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 OATP04181 439 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 CLTAP09496 248 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 TNNI1P19237 187 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 SP4Q02446 784 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 PPARDQ03181 441 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 STRN3Q13033 797 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 GKAP1Q5VSY0 366 aaPredicted RBP13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 FBXW10Q5XX13 1052 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 SPOPLQ6IQ16 392 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 PLEKHA7Q6IQ23 1121 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 CATSPERGQ6ZRH7 1159 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 KATNAL2Q8IYT4 538 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 UBR7Q8N806 425 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 ATG4AQ8WYN0 398 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 P3H4Q92791 437 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 ZKSCAN4Q969J2 545 aaPredicted RBP13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 SELENOSQ9BQE4 189 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 IGKV6D-21A0A0A0MT36 114 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 GAS8O95995 478 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 TGFB2P61812 414 aa13.37□□□□□ -0.27
TSPAN6-201ENST00000373020 SP2Q02086 613 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms