RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ZBTB33Q86T24 672 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 RASAL3Q86YV0 1011 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 ABRAQ8N0Z2 381 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 MREGQ8N565 214 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 TSEN2Q8NCE0 465 aaKnown RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 APOBEC3GQ9HC16 384 aaKnown RBP14.34□□□□□ -0.11
CSTF2-201ENST00000372972 IVNS1ABPQ9Y6Y0 642 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 PLXNA1Q9UIW2 1896 aa14.34□□□□□ -0.11
CSTF2-201ENST00000372972 CCDC66A2RUB6 948 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 CLTAP09496 248 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 TNFSF9P41273 254 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 PTENP60484 403 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 MCL1Q07820 350 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 NCOA4Q13772 614 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 TFDP1Q14186 410 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 SURF1Q15526 300 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 RHPN2Q8IUC4 686 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 WDR49Q8IV35 697 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 MCOLN2Q8IZK6 566 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 RIN2Q8WYP3 895 aaPredicted RBP14.33□□□□□ -0.12
CSTF2-201ENST00000372972 KRT35Q92764 455 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 CD101Q93033 1021 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 TRIM11Q96F44 468 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 CNTN6Q9UQ52 1028 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 ASAP2O43150 1006 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 SPOPO43791 374 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 OPA1O60313 960 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 MYBL1P10243 752 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 HSPA6P17066 643 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 NOP14P78316 857 aaKnown RBP14.33□□□□□ -0.12
CSTF2-201ENST00000372972 POU5F1Q01860 360 aaKnown RBP14.33□□□□□ -0.12
CSTF2-201ENST00000372972 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
CSTF2-201ENST00000372972 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 NAA35Q5VZE5 725 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 GOLGA6L1Q8N7Z2 621 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 TRAPPC12Q8WVT3 735 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 BTBD6Q96KE9 485 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 IMPG2Q9BZV3 1241 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 AVENQ9NQS1 362 aaPredicted RBP14.33□□□□□ -0.12
CSTF2-201ENST00000372972 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 NR2E1Q9Y466 385 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 NUB1Q9Y5A7 615 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 PCDHA3Q9Y5H8 950 aa14.33□□□□□ -0.12
CSTF2-201ENST00000372972 ACKR2O00590 384 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 ABLIM1O14639 778 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 TTI1O43156 1089 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 CYP1A1P04798 512 aaPredicted RBP14.32□□□□□ -0.12
CSTF2-201ENST00000372972 CTNNA2P26232 953 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 CTNNA1P35221 906 aaKnown RBP14.32□□□□□ -0.12
CSTF2-201ENST00000372972 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 LAMC2Q13753 1193 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 TMEM270Q6UE05 265 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 FZD8Q9H461 694 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 FAM204AQ9H8W3 233 aa14.32□□□□□ -0.12
CSTF2-201ENST00000372972 CPSF3Q9UKF6 684 aaKnown RBP14.32□□□□□ -0.12
CSTF2-201ENST00000372972 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
CSTF2-201ENST00000372972 IGF2BP3O00425 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 CST3P01034 146 aaPredicted RBP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 NSFP46459 744 aaKnown RBP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 MARCKSL1P49006 195 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 CENPCQ03188 943 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 GRB14Q14449 540 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 CFAP58Q5T655 872 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 SEL1L2Q5TEA6 688 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 TAPT1Q6NXT6 567 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 ADAT2Q7Z6V5 191 aaKnown RBP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 PLEKHH3Q7Z736 793 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 IQCKQ8N0W5 287 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 CYFIP2Q96F07 1278 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 NLRP4Q96MN2 994 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 SH3GL2Q99962 352 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 RNPEPQ9H4A4 650 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 MANSC4A6NHS7 340 aaPredicted RBP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 GOLGA8KD6RF30 607 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 INO80B-WBP1J3KQ70 363 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 ASS1P00966 412 aaKnown RBP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 PROZP22891 400 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 ECHS1P30084 290 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 GNA15P30679 374 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 MAPK4P31152 587 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 ARHGAP1Q07960 439 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 ZNF484Q5JVG2 852 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 RGMBQ6NW40 437 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 AADACL2Q6P093 401 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 MPZL3Q6UWV2 235 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
CSTF2-201ENST00000372972 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
CSTF2-201ENST00000372972 SAPCD2Q86UD0 394 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms