RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
CTPS1-202ENST00000372621 PROSCO94903 275 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 MPP2Q14168 576 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 LRRC14Q15048 493 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 KYNUQ16719 465 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 TRIM11Q96F44 468 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 GEMIN8Q9NWZ8 242 aaKnown RBP13.58□□□□□ -0.23
CTPS1-202ENST00000372621 NINJ2Q9NZG7 142 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 LGALS13Q9UHV8 139 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 PCDHA10Q9Y5I2 948 aa13.58□□□□□ -0.23
CTPS1-202ENST00000372621 O00370 1275 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 GAS8O95995 478 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 ATP5DP30049 168 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 RTP1P59025 263 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 GALNTL6Q49A17 601 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 SF3A3Q12874 501 aaKnown RBP eCLIP13.58□□□□□ -0.241e-6■□□□□ 9.2
CTPS1-202ENST00000372621 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
CTPS1-202ENST00000372621 NBPF9Q3BBW0 867 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 DAB2IPQ5VWQ8 1189 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 CKAP2Q8WWK9 683 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 FAM213AQ9BRX8 229 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 XPNPEP1Q9NQW7 623 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 EURLQ9NYK6 297 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 ANAPC5Q9UJX4 755 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 AGAP1Q9UPQ3 857 aa13.58□□□□□ -0.24
CTPS1-202ENST00000372621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTPS1-202ENST00000372621 SIP14410 1827 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 FOXO6A8MYZ6 492 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 TCP11X1B4DZS4 312 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 HNRNPDLO14979 420 aaKnown RBP13.57□□□□□ -0.24
CTPS1-202ENST00000372621 RALAP11233 206 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 CETPP11597 493 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 ATF2P15336 505 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 ACO1P21399 889 aaKnown RBP13.57□□□□□ -0.24
CTPS1-202ENST00000372621 HSPA1LP34931 641 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 CYP4X1Q8N118 509 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 CEP170P1Q96L14 293 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 PWWP2AQ96N64 755 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 FGFR1OP2Q9NVK5 253 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 USP15Q9Y4E8 981 aaPredicted RBP13.57□□□□□ -0.24
CTPS1-202ENST00000372621 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
CTPS1-202ENST00000372621 PSTPIP1O43586 416 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 C4BPAP04003 597 aaKnown RBP13.57□□□□□ -0.24
CTPS1-202ENST00000372621 FDX1P10109 184 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 WNT7BP56706 349 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 CCNG2Q16589 344 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 ZACNQ401N2 412 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 C2CD6Q53TS8 623 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 ANKS1BQ7Z6G8 1248 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 PHLDB2Q86SQ0 1253 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 GABBR1Q9UBS5 961 aa13.57□□□□□ -0.24
CTPS1-202ENST00000372621 CFHP08603 1231 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 ADCY8P40145 1251 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 BPIFB4P59827 614 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 PSMD6Q15008 389 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 KATNAL2Q8IYT4 538 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 MGARPQ8TDB4 240 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 DNAJC17Q9NVM6 304 aaKnown RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 THAP12O43422 761 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 EXTL3O43909 919 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 ATP6V1G2O95670 118 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 KLRC2P26717 231 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 DSG3P32926 999 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 TAS2R40P59535 323 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 TMEM63BQ5T3F8 832 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 HIBCHQ6NVY1 386 aaPredicted RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 XRRA1Q6P2D8 792 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 RPAINQ86UA6 219 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 MCM8Q9UJA3 840 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 CD2APQ9Y5K6 639 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 STYXL1Q9Y6J8 313 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 COL11A1P12107 1806 aaPredicted RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 CFAP73A6NFT4 308 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 DGAT1O75907 488 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 GJB6O95452 261 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 GH1P01241 217 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 KCNA2P16389 499 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 RDXP35241 583 aaKnown RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 MAP2K2P36507 400 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 MAMLD1Q13495 774 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 RIPK1Q13546 671 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 FAM133BQ5BKY9 247 aaKnown RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 TDRD10Q5VZ19 366 aaKnown RBP13.56□□□□□ -0.24
CTPS1-202ENST00000372621 RHOT1Q8IXI2 618 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 CCDC63Q8NA47 563 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 SCLT1Q96NL6 688 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 HEMGNQ9BXL5 484 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
CTPS1-202ENST00000372621 RLFQ13129 1914 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms