RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 KIAA1468Q9P260 1216 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 COL6A3P12111 3177 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 CALUO43852 315 aaPredicted RBP27.34■■□□□ 1.97
C9orf50-201ENST00000372478 EXOC3O60645 756 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 BMP6P22004 513 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 CA8P35219 290 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 ZNF445P59923 1031 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 DCLRE1AQ6PJP8 1040 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 ADGRD2Q7Z7M1 963 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 FAM84AQ96KN4 292 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 TSPAN18Q96SJ8 248 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 DMAC2Q9NW81 257 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 TRAF3IP3Q9Y228 551 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 DERAQ9Y315 318 aa27.34■■□□□ 1.97
C9orf50-201ENST00000372478 XPOTO43592 962 aaKnown RBP27.33■■□□□ 1.97
C9orf50-201ENST00000372478 EFEMP2O95967 443 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 MORC3Q14149 939 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 SPATA1Q5VX52 437 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 CD300LGQ6UXG3 332 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 BEST2Q8NFU1 509 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 B3GALT6Q96L58 329 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 C2CD2Q9Y426 696 aa27.33■■□□□ 1.97
C9orf50-201ENST00000372478 HIDE1A8MVS5 230 aa27.32■■□□□ 1.96
C9orf50-201ENST00000372478 CD44P16070 742 aaKnown RBP27.32■■□□□ 1.96
C9orf50-201ENST00000372478 CYP3A5P20815 502 aa27.32■■□□□ 1.96
C9orf50-201ENST00000372478 RPL9P32969 192 aaKnown RBP27.32■■□□□ 1.96
C9orf50-201ENST00000372478 COBLL1Q53SF7 1204 aa27.32■■□□□ 1.96
C9orf50-201ENST00000372478 ADSSL1Q8N142 457 aa27.32■■□□□ 1.96
C9orf50-201ENST00000372478 HERC2P3Q9BVR0 1158 aa27.32■■□□□ 1.96
C9orf50-201ENST00000372478 GTPBP4Q9BZE4 634 aaKnown RBP27.32■■□□□ 1.96
C9orf50-201ENST00000372478 SF3B1O75533 1304 aaKnown RBP eCLIP27.32■■□□□ 1.96
C9orf50-201ENST00000372478 TMEM189-UBE2V1I3L0A0 370 aa27.31■■□□□ 1.96
C9orf50-201ENST00000372478 SOD2P04179 222 aa27.31■■□□□ 1.96
C9orf50-201ENST00000372478 CTSAP10619 480 aa27.31■■□□□ 1.96
C9orf50-201ENST00000372478 TFAMQ00059 246 aaKnown RBP27.31■■□□□ 1.96
C9orf50-201ENST00000372478 ZCWPW2Q504Y3 356 aa27.31■■□□□ 1.96
C9orf50-201ENST00000372478 SLC9A9Q8IVB4 645 aa27.31■■□□□ 1.96
C9orf50-201ENST00000372478 RNF168Q8IYW5 571 aaPredicted RBP27.31■■□□□ 1.96
C9orf50-201ENST00000372478 NGRNQ9NPE2 291 aaKnown RBP27.31■■□□□ 1.96
C9orf50-201ENST00000372478 I3L4J1 428 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 CXCL14O95715 111 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 LRPAP1P30533 357 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 BRCC3P46736 316 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 CASP4P49662 377 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 SMC1AQ14683 1233 aaKnown RBP27.3■■□□□ 1.96
C9orf50-201ENST00000372478 LMBRD2Q68DH5 695 aaPredicted RBP27.3■■□□□ 1.96
C9orf50-201ENST00000372478 PDE12Q6L8Q7 609 aaKnown RBP27.3■■□□□ 1.96
C9orf50-201ENST00000372478 RBM23Q86U06 439 aaKnown RBP27.3■■□□□ 1.96
C9orf50-201ENST00000372478 VWA8A3KMH1 1905 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 SYCE3A1L190 88 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 C2CD2LO14523 706 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 PPEF2O14830 753 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 NR2F2P24468 414 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 GTF2F1P35269 517 aaKnown RBP eCLIP27.3■■□□□ 1.96
C9orf50-201ENST00000372478 CYP24A1Q07973 514 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 SKIV2LQ15477 1246 aaKnown RBP27.3■■□□□ 1.96
C9orf50-201ENST00000372478 FAM171A1Q5VUB5 890 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 CEP135Q66GS9 1140 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 CCDC127Q96BQ5 260 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 DPP3Q9NY33 737 aa27.3■■□□□ 1.96
C9orf50-201ENST00000372478 PTPRJQ12913 1337 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.29■■□□□ 1.96
C9orf50-201ENST00000372478 PER2O15055 1255 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 STIM1Q13586 685 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 KLHL10Q6JEL2 608 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 MRPL43Q8N983 215 aaKnown RBP27.29■■□□□ 1.96
C9orf50-201ENST00000372478 TMEM174Q8WUU8 243 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 IGFLR1Q9H665 355 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 STK39Q9UEW8 545 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 NUB1Q9Y5A7 615 aa27.29■■□□□ 1.96
C9orf50-201ENST00000372478 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.29■■□□□ 1.96
C9orf50-201ENST00000372478 PRUNE2Q8WUY3 3088 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 C2orf71A6NGG8 1288 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 URODP06132 367 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 NRIP1P48552 1158 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 PMS1P54277 932 aaKnown RBP27.28■■□□□ 1.96
C9orf50-201ENST00000372478 HYAL1Q12794 435 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 MYBPC2Q14324 1141 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 BMS1Q14692 1282 aaKnown RBP27.28■■□□□ 1.96
C9orf50-201ENST00000372478 PTPN14Q15678 1187 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 CENPPQ6IPU0 288 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 KIAA1841Q6NSI8 718 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 NT5DC4Q86YG4 428 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 EEF2KMTQ96G04 330 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 MFSD14AQ96MC6 490 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 TLE6Q9H808 572 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 SCN1AP35498 2009 aa27.28■■□□□ 1.96
C9orf50-201ENST00000372478 TRIM49BA6NDI0 452 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 PPP1R3GB7ZBB8 358 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 DLATP10515 647 aaKnown RBP27.27■■□□□ 1.96
C9orf50-201ENST00000372478 GLUD2P49448 558 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 PSMD6Q15008 389 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 SURF1Q15526 300 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 NFIL3Q16649 462 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 USP41Q3LFD5 358 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 C9orf57Q5W0N0 161 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 ANKRD40Q6AI12 368 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 LRSAM1Q6UWE0 723 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 CEP57Q86XR8 500 aa27.27■■□□□ 1.96
C9orf50-201ENST00000372478 TRIML1Q8N9V2 468 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms