RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PLEKHO2Q8TD55 490 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SCG3Q8WXD2 468 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 DNAJC9Q8WXX5 260 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 P3H4Q92791 437 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SPSB2Q99619 263 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SYT11Q9BT88 431 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PI4K2AQ9BTU6 479 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 NUP85Q9BW27 656 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CARD9Q9H257 536 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 DDX4Q9NQI0 724 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 TOPORSQ9NS56 1045 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 HOMER3Q9NSC5 361 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ARL8BQ9NVJ2 186 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CYP39A1Q9NYL5 469 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 KANSL3Q9P2N6 904 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 MTRF1LQ9UGC7 380 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 A0A0G2JND7 137 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 GSTTP1A0A1W2PQM5 241 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 LRRD1A4D1F6 860 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 KRT10P13645 584 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CTNNA2P26232 953 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 IVDP26440 423 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 GCAP28676 217 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CCNFP41002 786 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SERPINB4P48594 390 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SCNN1DP51172 638 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SPIRE1Q08AE8 756 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CALCOCO2Q13137 446 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PPP2R5CQ13362 524 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 LAMB3Q13751 1172 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 MAPK6Q16659 721 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SGO2Q562F6 1265 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ACSBG2Q5FVE4 666 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 GALNT17Q6IS24 598 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 EPM2AIP1Q7L775 607 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 TAOK1Q7L7X3 1001 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 EIF1ADQ8N9N8 165 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ASAP3Q8TDY4 903 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 FBF1Q8TES7 1133 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 USP6NLQ92738 828 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 PTPRN2Q92932 1015 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 DYDC2Q96IM9 177 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC37BQ96QE4 947 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 AGPAT1Q99943 283 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 RTFDC1Q9BY42 306 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 CADM1Q9BY67 442 aaKnown RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 RAB34Q9BZG1 259 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 FHDC1Q9C0D6 1143 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 RIOX1Q9H6W3 641 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 SAE1Q9UBE0 346 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-204ENST00000372246 ZBTB21Q9ULJ3 1066 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 USH1CQ9Y6N9 552 aa5.77□□□□□ -1.49
ATG4A-204ENST00000372246 EMSYQ7Z589 1322 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CAPN9O14815 690 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 TBX10O75333 385 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 RNF8O76064 485 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ECEL1O95672 775 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 TTC4O95801 387 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ALAS1P13196 640 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CCNB1P14635 433 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 FERP16591 822 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CD58P19256 250 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ATP6V1C1P21283 382 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ADRA1DP25100 572 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 TCP10Q12799 353 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 DHX34Q14147 1143 aaKnown RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 RBBP5Q15291 538 aaKnown RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 MTFR1Q15390 333 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 QRICH1Q2TAL8 776 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 SNX30Q5VWJ9 437 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 LMBRD2Q68DH5 695 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 OR52E8Q6IFG1 317 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 BRICD5Q6PL45 260 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 RNF19BQ6ZMZ0 732 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 FRMD5Q7Z6J6 570 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC6Q86X45 466 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 PPM1KQ8N3J5 372 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 FAM160A2Q8N612 972 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 NEDD1Q8NHV4 660 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CPA5Q8WXQ8 436 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 HLA-CQ95604 372 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC127Q96BQ5 260 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 DNAJC1Q96KC8 554 aaKnown RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CBWD1Q9BRT8 395 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 MAK16Q9BXY0 300 aaKnown RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC134Q9H6E4 229 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 MTMR4Q9NYA4 1195 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 LMCD1Q9NZU5 365 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 RASAL2Q9UJF2 1139 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 TRAF3IP3Q9Y228 551 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 USTQ9Y2C2 406 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC42Q9Y546 428 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 PCDHA1Q9Y5I3 950 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 KIAA1551Q9HCM1 1747 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 NCANO14594 1321 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 FAM187AA6NFU0 413 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 PLSCR1O15162 318 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms