RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 H0Y3Z8 333 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 PDXKO00764 312 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 GRIK1P39086 918 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRPC1P48995 793 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 SHC4Q6S5L8 630 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 FBXL13Q8NEE6 735 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 APPL2Q8NEU8 664 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 CHMP6Q96FZ7 201 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 DNAJC17Q9NVM6 304 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 LZTS1Q9Y250 596 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 ZDHHC9Q9Y397 364 aa14.05□□□□□ -0.16
RAPGEF1-201ENST00000372189 COPEO14579 308 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 CYP2C19P33261 490 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 ARL4CP56559 192 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 TSC22D1Q15714 1073 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 FRMD5Q7Z6J6 570 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 SRLQ86TD4 932 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 ACER1Q8TDN7 264 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 RBM41Q96IZ5 413 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 EHD4Q9H223 541 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 KCNA2P16389 499 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 GJA8P48165 433 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 GFPT1Q06210 699 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 TEKT4Q8WW24 435 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 C11orf70Q9BRQ4 267 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 TMPRSS15P98073 1019 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 KIAA1755Q5JYT7 1200 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 CAPRIN2Q6IMN6 1127 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRAF7Q6Q0C0 670 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 HSPBP1Q9NZL4 362 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 DDHD2O94830 711 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 RBP5P82980 135 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 DRAP1Q14919 205 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 TMEM132DQ14C87 1099 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 CHCHD4Q8N4Q1 142 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 SH2D3AQ9BRG2 576 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 HAUS5O94927 633 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 MSL3P1P0C860 447 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 PMLP29590 882 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 DAB2P98082 770 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 KRT33BQ14525 404 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 TTC17Q96AE7 1141 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 LRRC37BQ96QE4 947 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 GINS4Q9BRT9 223 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 CCSER2Q9H7U1 834 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 C10orf88Q9H8K7 445 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 VIPAS39Q9H9C1 493 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 SLC38A7Q9NVC3 462 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 PCDHB7Q9Y5E2 793 aa14.04□□□□□ -0.16
RAPGEF1-201ENST00000372189 ARHGAP23Q9P227 1491 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM187AA6NFU0 413 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 PCP4L1A6NKN8 68 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 ALDH1A1P00352 501 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 PYGBP11216 843 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FGFR2P21802 821 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 TCF7P36402 384 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 IQCB1Q15051 598 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 PLA2G4FQ68DD2 849 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 EPC1Q9H2F5 836 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 SLC16A3O15427 465 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRIM49P0CI25 452 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRIM49CP0CI26 452 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 MYBL1P10243 752 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 NME3Q13232 169 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 KCNB1Q14721 858 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 CEP78Q5JTW2 689 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM47EQ6ZV65 393 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 APOBEC2Q9Y235 224 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 MCF2P10911 925 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 GRK2P25098 689 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 TFDP2Q14188 446 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 TRIM72Q6ZMU5 477 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 REEP2Q9BRK0 252 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 KLHL31Q9H511 634 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM205CA6NFA0 338 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 HSPA4LO95757 839 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 PDHA1P08559 390 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 RAB14P61106 215 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 OLR1P78380 273 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM117BQ6P1L5 589 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 TXNRD3Q86VQ6 643 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 THOC1Q96FV9 657 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FBXO28Q9NVF7 368 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FBXO9Q9UK97 447 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 SOX5P35711 763 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 AP2B1P63010 937 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 LMBRD2Q68DH5 695 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 GLB1LQ6UWU2 654 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FAM83AQ86UY5 434 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms