RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 RNFT2Q96EX2 444 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 PLCH2O75038 1416 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ANO9A1A5B4 782 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 DFFAO00273 331 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SERPINB5P36952 375 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 ALAS1P13196 640 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 ITGA3P26006 1051 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SOAT1P35610 550 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 FUT11Q495W5 492 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 TAF5Q15542 800 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 WDR36Q8NI36 951 aaKnown RBP16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 ECSITQ9BQ95 431 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SNTNA6NMZ2 147 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 CACNA2D1P54289 1103 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SCUBE1Q8IWY4 988 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 C4orf33Q8N1A6 199 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 DPP10Q8N608 796 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 LRRC1Q9BTT6 524 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 TMEM120BA0PK00 339 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 MAP3K13O43283 966 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 FBXO11Q86XK2 927 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 NGLY1Q96IV0 654 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 TEX28O15482 410 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SERPIND1P05546 499 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 STARP49675 285 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 IZUMO2Q6UXV1 221 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 RASSF6Q6ZTQ3 369 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 ARMCX2Q7L311 632 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SPATA4Q8NEY3 305 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 TMEM165Q9HC07 324 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 SLC9A2Q9UBY0 812 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 CDY2AQ9Y6F7 541 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 CDY1Q9Y6F8 540 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 TNKSO95271 1327 aa16.03■□□□□ 0.16
GTF3C4-201ENST00000372146 PEX1O43933 1283 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 ITGADQ13349 1161 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 RNF19BQ6ZMZ0 732 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 SLC7A3Q8WY07 619 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 HAO1Q9UJM8 370 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 FAM187AA6NFU0 413 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 C18orf25Q96B23 403 aaPredicted RBP16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 WBP11Q9Y2W2 641 aaKnown RBP16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 SNX13Q9Y5W8 968 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 TPST1O60507 370 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 ATG14Q6ZNE5 492 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 B3GALT6Q96L58 329 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 DDX56Q9NY93 547 aaKnown RBP16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 CCDC162PA2VCL2 907 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 CCDC182A6NF36 153 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 ATF4P18848 351 aaPredicted RBP16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 GRSF1Q12849 480 aaKnown RBP eCLIP16.02■□□□□ 0.166e-6■■□□□ 11.5
GTF3C4-201ENST00000372146 PTGISQ16647 500 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 METTL22Q9BUU2 404 aaPredicted RBP16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 KLHL3Q9UH77 587 aa16.02■□□□□ 0.16
GTF3C4-201ENST00000372146 PTPRKQ15262 1439 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 VN1R5Q7Z5H4 357 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 TTC30AQ86WT1 665 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 WDR24Q96S15 920 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 CCDC59Q9P031 241 aaKnown RBP16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 JAK1P23458 1154 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 KCNK10P57789 538 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 RPS7P62081 194 aaKnown RBP16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 EXOSC10Q01780 885 aaKnown RBP16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 CHURC1Q8WUH1 139 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 C17orf50Q8WW18 174 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 CITED4Q96RK1 184 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 PARNO95453 639 aaKnown RBP16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 CYFIP1Q7L576 1253 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 WDR17Q8IZU2 1322 aa16.02■□□□□ 0.15
GTF3C4-201ENST00000372146 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 KCNN4O15554 427 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 MIS18BP1Q6P0N0 1132 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 LPIN2Q92539 896 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 TTC39BQ5VTQ0 682 aaPredicted RBP16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 KIAA0408Q6ZU52 694 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 MIER2Q8N344 545 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 PSD3Q9NYI0 1048 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 AGRPO00253 132 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 MOV10L1Q9BXT6 1211 aaKnown RBP16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 SP110Q9HB58 689 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 LRPAP1P30533 357 aa16.01■□□□□ 0.15
GTF3C4-201ENST00000372146 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms