RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF844Q08AG5 666 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 CUL1Q13616 776 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 GSTA5Q7RTV2 222 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 C12orf56Q8IXR9 622 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 TMEM192Q8IY95 271 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 GPC2Q8N158 579 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 MGARPQ8TDB4 240 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 C10orf88Q9H8K7 445 aa12.55□□□□□ -0.4
PDE6C-201ENST00000371447 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 P4HA2O15460 535 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 GTF2H1P32780 548 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 PTENP60484 403 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 RASGEF1CQ8N431 466 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 SEPT1Q8WYJ6 367 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 CALR3Q96L12 384 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 NAP1L3Q99457 506 aaPredicted RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 HERPUD2Q9BSE4 406 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 TTC7AQ9ULT0 858 aaPredicted RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 ANXA13P27216 316 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 SLC29A2Q14542 456 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 TMC3Q7Z5M5 1100 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 ATP6V1G3Q96LB4 118 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 TIPINQ9BVW5 301 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 ST6GALNAC4Q9H4F1 302 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 SLITRK6Q9H5Y7 841 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 R3HDM2Q9Y2K5 976 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 POLR2AP24928 1970 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 RFX1P22670 979 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 IFNAR2P48551 515 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 CUL2Q13617 745 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 ZACNQ401N2 412 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 SYCP2LQ5T4T6 812 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 RNF187Q5TA31 235 aaPredicted RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 DCUN1D2Q6PH85 259 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 MCOLN2Q8IZK6 566 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 C1orf131Q8NDD1 294 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
PDE6C-201ENST00000371447 PSD3Q9NYI0 1048 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
PDE6C-201ENST00000371447 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
PDE6C-201ENST00000371447 RALAP11233 206 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 LAMTOR4Q0VGL1 99 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 ZNF568Q3ZCX4 644 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 EEF1DP3Q658K8 133 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
PDE6C-201ENST00000371447 TBK1Q9UHD2 729 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 RASAL2Q9UJF2 1139 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 PNMA2Q9UL42 364 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 ADAMTS5Q9UNA0 930 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 PCDHB2Q9Y5E7 798 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 MYO1CO00159 1063 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 GRIN3BO60391 1043 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 CAND2O75155 1236 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 IFNB1P01574 187 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 VTNP04004 478 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 PRKCBP05771 671 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 IVLP07476 585 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 GARTP22102 1010 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
PDE6C-201ENST00000371447 IREB2P48200 963 aaKnown RBP12.53□□□□□ -0.4
PDE6C-201ENST00000371447 PEX5P50542 639 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 RDM1Q8NG50 284 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 OPTNQ96CV9 577 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 CPB2Q96IY4 423 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 TJP2Q9UDY2 1190 aa12.53□□□□□ -0.4
PDE6C-201ENST00000371447 MAFBQ9Y5Q3 323 aaPredicted RBP12.53□□□□□ -0.4
PDE6C-201ENST00000371447 C4BPAP04003 597 aaKnown RBP12.52□□□□□ -0.4
PDE6C-201ENST00000371447 ZNF286BP0CG31 522 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 CXCL8P10145 99 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 ADCY8P40145 1251 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 LIG3P49916 1009 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 OAZ1P54368 228 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 TAS2R40P59535 323 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 MAPK6Q16659 721 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 FAM160B1Q5W0V3 765 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 CHST13Q8NET6 341 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 MMP19Q99542 508 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 SH3GL2Q99962 352 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 RNPEPQ9H4A4 650 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 SYNCQ9H7C4 482 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.4
PDE6C-201ENST00000371447 AKT3Q9Y243 479 aa12.52□□□□□ -0.4
PDE6C-201ENST00000371447 MIF4GDA9UHW6 222 aaKnown RBP12.52□□□□□ -0.41
PDE6C-201ENST00000371447 CLGNO14967 610 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms