RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PDCD11Q14690 1871 aaKnown RBP17.26■□□□□ 0.35
PFDN4-201ENST00000371419 RPL9P32969 192 aaKnown RBP17.25■□□□□ 0.35
PFDN4-201ENST00000371419 CLCNKBP51801 687 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 WNT7BP56706 349 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 CYP24A1Q07973 514 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 ADAM9Q13443 819 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 SPATA1Q5VX52 437 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 MLKLQ8NB16 471 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 BEST2Q8NFU1 509 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
PFDN4-201ENST00000371419 POF1BQ8WVV4 589 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 NELFBQ8WX92 580 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 RABGGTAQ92696 567 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 MFSD14AQ96MC6 490 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 MARCH5Q9NX47 278 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 ANK1P16157 1881 aa17.25■□□□□ 0.35
PFDN4-201ENST00000371419 COL4A4P53420 1690 aaPredicted RBP17.25■□□□□ 0.35
PFDN4-201ENST00000371419 BICDL2A1A5D9 508 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 TADA2AO75478 443 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 CASP4P49662 377 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
PFDN4-201ENST00000371419 NLRP12P59046 1061 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PSMD6Q15008 389 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PTPROQ16827 1216 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 UPP1Q16831 310 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 EFCAB13Q8IY85 973 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 CACTINQ8WUQ7 758 aaKnown RBP17.24■□□□□ 0.35
PFDN4-201ENST00000371419 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 ADAM28Q9UKQ2 775 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 CTNND2Q9UQB3 1225 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 TRIM49BA6NDI0 452 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 F8W810 466 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 TMEM189-UBE2V1I3L0A0 370 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PODXLO00592 558 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 CETN3O15182 167 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 MAPK13O15264 365 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 B3GAT3O94766 335 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 KIF4AO95239 1232 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 DNAJB1P25685 340 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 LRPAP1P30533 357 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 TFAMQ00059 246 aaKnown RBP17.24■□□□□ 0.35
PFDN4-201ENST00000371419 FKBP3Q00688 224 aaKnown RBP17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PAK1Q13153 545 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 ADGRE1Q14246 886 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 FOXR2Q6PJQ5 311 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 DDX53Q86TM3 631 aaKnown RBP17.24■□□□□ 0.35
PFDN4-201ENST00000371419 CCDC127Q96BQ5 260 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 MRPL38Q96DV4 380 aaKnown RBP17.24■□□□□ 0.35
PFDN4-201ENST00000371419 FNBP1Q96RU3 617 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 LMCD1Q9NZU5 365 aa17.24■□□□□ 0.35
PFDN4-201ENST00000371419 PLXNA4Q9HCM2 1894 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 AKAP3O75969 853 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 DLATP10515 647 aaKnown RBP17.23■□□□□ 0.35
PFDN4-201ENST00000371419 POU3F3P20264 500 aaPredicted RBP17.23■□□□□ 0.35
PFDN4-201ENST00000371419 IGFBP4P22692 258 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 PSMC2P35998 433 aaKnown RBP17.23■□□□□ 0.35
PFDN4-201ENST00000371419 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 STX1AQ16623 288 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 WDR49Q8IV35 697 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 ZC3H3Q8IXZ2 948 aaKnown RBP17.23■□□□□ 0.35
PFDN4-201ENST00000371419 TLR9Q9NR96 1032 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 DPP3Q9NY33 737 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 DACH1Q9UI36 760 aa17.23■□□□□ 0.35
PFDN4-201ENST00000371419 TMEM191BP0C7N4 346 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 FOSL2P15408 326 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 STX17P56962 302 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 CAMK1Q14012 370 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 DUOXA2Q1HG44 320 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 DPCR1Q3MIW9 517 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 ANO6Q4KMQ2 910 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 TTI2Q6NXR4 508 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 FUT10Q6P4F1 479 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 FAM186BQ8IYM0 893 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 VPS52Q8N1B4 723 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 HASPINQ8TF76 798 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 EEF2KMTQ96G04 330 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 ANKRD36BP1Q96IX9 119 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 CGRRF1Q99675 332 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 MKNK1Q9BUB5 465 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 VN1R3Q9BXE9 311 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 INTS13Q9NVM9 706 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 MTCH2Q9Y6C9 303 aa17.22■□□□□ 0.35
PFDN4-201ENST00000371419 SF3B1O75533 1304 aaKnown RBP eCLIP17.22■□□□□ 0.35
PFDN4-201ENST00000371419 EFEMP2O95967 443 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 TNNC2P02585 160 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 SOD2P04179 222 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 TNNI1P19237 187 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 ERVFC1P60507 584 aa17.21■□□□□ 0.35
PFDN4-201ENST00000371419 ELAVL2Q12926 359 aaKnown RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 BMS1Q14692 1282 aaKnown RBP17.21■□□□□ 0.35
PFDN4-201ENST00000371419 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms