RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CNKSR2Q8WXI2 1034 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 MTRF1LQ9UGC7 380 aaKnown RBP30.89■■■□□ 2.54
SSBP3-204ENST00000371320 NOVA2Q9UNW9 492 aaKnown RBP30.89■■■□□ 2.54
SSBP3-204ENST00000371320 ADGRA2Q96PE1 1338 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 FSCN2O14926 492 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 ADCY3O60266 1144 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 SLC1A1P43005 524 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 TMEM270Q6UE05 265 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 SGIP1Q9BQI5 828 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 SPATC1LQ9H0A9 340 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 LRRC19Q9H756 370 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 PASKQ96RG2 1323 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 WDR90Q96KV7 1748 aa30.89■■■□□ 2.54
SSBP3-204ENST00000371320 HARSP12081 509 aaKnown RBP30.88■■■□□ 2.53
SSBP3-204ENST00000371320 KCNJ1P48048 391 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 DLK2Q6UY11 383 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 TRIM72Q6ZMU5 477 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 CNTNAP2Q9UHC6 1331 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 CLTAP09496 248 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 TBXAS1P24557 533 aaPredicted RBP30.88■■■□□ 2.53
SSBP3-204ENST00000371320 GNA15P30679 374 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 LLGL1Q15334 1064 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 PTGISQ16647 500 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 C2CD6Q53TS8 623 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 LIN9Q5TKA1 542 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 GADL1Q6ZQY3 521 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 MON1BQ7L1V2 547 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 OR5B17Q8NGF7 314 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 EPB41L4BQ9H329 900 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 CSADQ9Y600 493 aa30.88■■■□□ 2.53
SSBP3-204ENST00000371320 ECEL1O95672 775 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 NUDT17P0C025 328 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 POTEJP0CG39 1038 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 TCF7P36402 384 aaPredicted RBP30.87■■■□□ 2.53
SSBP3-204ENST00000371320 NOP14P78316 857 aaKnown RBP30.87■■■□□ 2.53
SSBP3-204ENST00000371320 SEZ6Q53EL9 994 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 LLGL2Q6P1M3 1020 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 ABRAQ8N0Z2 381 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 SEPT1Q8WYJ6 367 aa30.87■■■□□ 2.53
SSBP3-204ENST00000371320 SBDSQ9Y3A5 250 aaKnown RBP eCLIP30.87■■■□□ 2.53
SSBP3-204ENST00000371320 TRIM66O15016 1216 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 MAFO75444 373 aaPredicted RBP30.86■■■□□ 2.53
SSBP3-204ENST00000371320 TGFB3P10600 412 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 SGO2Q562F6 1265 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 DENND2CQ68D51 928 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 PASD1Q8IV76 773 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 C10orf67Q8IYJ2 551 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 NLGN2Q8NFZ4 835 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 NUB1Q9Y5A7 615 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 UTRNP46939 3433 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 DRP2Q13474 957 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 NCOA4Q13772 614 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 EEPD1Q7L9B9 569 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 HOOK3Q86VS8 718 aa30.86■■■□□ 2.53
SSBP3-204ENST00000371320 RBBP8NLQ8NC74 664 aaPredicted RBP30.86■■■□□ 2.53
SSBP3-204ENST00000371320 PRPF31Q8WWY3 499 aaKnown RBP30.86■■■□□ 2.53
SSBP3-204ENST00000371320 CFHP08603 1231 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 MAGOHP61326 146 aaKnown RBP30.85■■■□□ 2.53
SSBP3-204ENST00000371320 PPP2R2AP63151 447 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 PPP1R7Q15435 360 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 METTL7BQ6UX53 244 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 C1orf54Q8WWF1 131 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 C11orf70Q9BRQ4 267 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 TSPYL1Q9H0U9 437 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 LRRC4CQ9HCJ2 640 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 ADAM22Q9P0K1 906 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 SLC12A6Q9UHW9 1150 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 SIP14410 1827 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 UMODL1Q5DID0 1318 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 CORO7P57737 925 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 NOMO3P69849 1222 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 IRX5P78411 483 aaPredicted RBP30.85■■■□□ 2.53
SSBP3-204ENST00000371320 LY6KQ17RY6 165 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 ZPBP2Q6X784 338 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 MAIP1Q8WWC4 291 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 PAGR1Q9BTK6 254 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 AZI2Q9H6S1 392 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 CNTN6Q9UQ52 1028 aa30.85■■■□□ 2.53
SSBP3-204ENST00000371320 ANKRD65E5RJM6 399 aa30.84■■■□□ 2.53
SSBP3-204ENST00000371320 PROSCO94903 275 aa30.84■■■□□ 2.53
SSBP3-204ENST00000371320 SHBGP04278 402 aa30.84■■■□□ 2.53
SSBP3-204ENST00000371320 EFNA5P52803 228 aa30.84■■■□□ 2.53
SSBP3-204ENST00000371320 ART4Q93070 314 aa30.84■■■□□ 2.53
SSBP3-204ENST00000371320 RNF25Q96BH1 459 aaPredicted RBP30.84■■■□□ 2.53
SSBP3-204ENST00000371320 FAM107BQ9H098 131 aa30.84■■■□□ 2.53
SSBP3-204ENST00000371320 FEZ2Q9UHY8 353 aaPredicted RBP30.84■■■□□ 2.53
SSBP3-204ENST00000371320 THAP12O43422 761 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 IRX3P78415 501 aaPredicted RBP30.83■■■□□ 2.53
SSBP3-204ENST00000371320 TCHPQ9BT92 498 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 IMPG2Q9BZV3 1241 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 SRRM3A6NNA2 597 aaPredicted RBP30.83■■■□□ 2.53
SSBP3-204ENST00000371320 TTLL13PA6NNM8 815 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 DCDC2CA8MYV0 355 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 SSTR3P32745 418 aaPredicted RBP30.83■■■□□ 2.53
SSBP3-204ENST00000371320 BRSK2Q8IWQ3 736 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 UPF1Q92900 1129 aaKnown RBP eCLIP30.83■■■□□ 2.533e-13■□□□□ 10
SSBP3-204ENST00000371320 SLCO2A1Q92959 643 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 VCPIP1Q96JH7 1222 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 FAM167AQ96KS9 214 aa30.83■■■□□ 2.53
SSBP3-204ENST00000371320 FAM129AQ9BZQ8 928 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms