RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TMEM117Q9H0C3 514 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ING2Q9H160 280 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 CHORDC1Q9UHD1 332 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 CPA4Q9UI42 421 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 TRIM33Q9UPN9 1127 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ERCC6L2Q5T890 1561 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 AGRPO00253 132 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 LUC7L3O95232 432 aaKnown RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 NCAM1P13591 858 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 HMOX2P30519 316 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ACSF2Q96CM8 615 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 WNT8AQ9H1J5 351 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 IQSEC2Q5JU85 1478 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 H0Y626 953 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 DGAT1O75907 488 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ZFXP17010 805 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 AARSP49588 968 aaKnown RBP eCLIP9□□□□□ -0.97
ABCA4-201ENST00000370225 HARS2P49590 506 aaKnown RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 DEUP1Q05D60 604 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 CCDC85BQ15834 202 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 EPC2Q52LR7 807 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ANKRD13AQ8IZ07 590 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 TSSK1BQ9BXA7 367 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ERAP1Q9NZ08 941 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 KDM6AO15550 1401 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 TTC26A0AVF1 554 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ENDOD1O94919 500 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 DAB2P98082 770 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ATP2C1P98194 919 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 SV2CQ496J9 727 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 MEI1Q5TIA1 1274 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 FOPNLQ96NB1 174 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 YME1L1Q96TA2 773 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 MOV10L1Q9BXT6 1211 aaKnown RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 VCPKMTQ9H867 229 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 PKP3Q9Y446 797 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 EIF4E1BA6NMX2 242 aaKnown RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 ZC3H11AO75152 810 aaKnown RBP eCLIP9□□□□□ -0.97
ABCA4-201ENST00000370225 VTNP04004 478 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 EPB42P16452 691 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 AP3M2P53677 418 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 PDCLQ13371 301 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ABTB1Q969K4 478 aaPredicted RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 RAD18Q9NS91 495 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 PCDHGB4Q9UN71 923 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 CDC42BPBQ9Y5S2 1711 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 GTPBP10A4D1E9 387 aaKnown RBP9□□□□□ -0.97
ABCA4-201ENST00000370225 ASAP2O43150 1006 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 PDHBP11177 359 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 GGCXP38435 758 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 ARHGAP15Q53QZ3 475 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 STOX1Q6ZVD7 989 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 NUP93Q8N1F7 819 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 IPMKQ8NFU5 416 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 GLT1D1Q96MS3 346 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 TUBB6Q9BUF5 446 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 RUBCNLQ9H714 662 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 CROCC2H7BZ55 1655 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 CCDC188H7C350 402 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF197O14709 1029 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 RTN2O75298 545 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 NDUFS3O75489 264 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ITGB3P05106 788 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 HIST1H2AGP0C0S8 130 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 HIST1H2ADP20671 130 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 CENPAP49450 140 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 GTF2A2P52657 109 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ZRANB3Q5FWF4 1079 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 TRIM72Q6ZMU5 477 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 FBXO16Q8IX29 292 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 FMR1NBQ8N0W7 255 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 HIST1H2AHQ96KK5 128 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 TGS1Q96RS0 853 aaKnown RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 HIST1H2AJQ99878 128 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 H2AFJQ9BTM1 129 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 WARS2Q9UGM6 360 aaKnown RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 HMGB1P1B2RPK0 211 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 SUPT3HB4E1H0 165 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 SUPT3HO75486 399 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 DNAJC8O75937 253 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 TRIML2Q8N7C3 387 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 RBBP8NLQ8NC74 664 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 EXOC4Q96A65 974 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 MED15Q96RN5 788 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 KDM4CQ9H3R0 1056 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ZFATQ9P243 1243 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 C3orf70A6NLC5 250 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 TTLL13PA6NNM8 815 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ANKRD65E5RJM6 399 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF185O15231 689 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 FLOT2Q14254 428 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 AARS2Q5JTZ9 985 aaKnown RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 HIBCHQ6NVY1 386 aaPredicted RBP8.99□□□□□ -0.97
ABCA4-201ENST00000370225 ARMC6Q6NXE6 501 aa8.99□□□□□ -0.97
ABCA4-201ENST00000370225 FRMD5Q7Z6J6 570 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms