RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 ATG4CQ96DT6 458 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 PCMTD2Q9NV79 361 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 PYGLP06737 847 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 MZF1P28698 734 aaPredicted RBP13.2□□□□□ -0.3
TMEM56-201ENST00000370203 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 RPAINQ86UA6 219 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 XPO7Q9UIA9 1087 aaKnown RBP13.2□□□□□ -0.3
TMEM56-201ENST00000370203 NAGPAQ9UK23 515 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 LAYNQ6UX15 382 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 CHP1Q99653 195 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 CYP2C9P11712 490 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 ITPRIPL1Q6GPH6 555 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
TMEM56-201ENST00000370203 ENTPD7Q9NQZ7 604 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 TMEM161AQ9NX61 479 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 C6orf203Q9P0P8 240 aaPredicted RBP13.2□□□□□ -0.3
TMEM56-201ENST00000370203 PITPNM2Q9BZ72 1349 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 NCAM1P13591 858 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 FBXO28Q9NVF7 368 aa13.2□□□□□ -0.3
TMEM56-201ENST00000370203 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 KRT7P08729 469 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 HSD17B4P51659 736 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ARFIP2P53365 341 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 SNRNP35Q16560 246 aaKnown RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 FSCBQ5H9T9 825 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 DNAJC7Q99615 494 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.33e-6■□□□□ 9.5
TMEM56-201ENST00000370203 TRIM54Q9BYV2 358 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ADNPQ9H2P0 1102 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 SYNMO15061 1565 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 GUCY1A3Q02108 690 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ARHGEF7Q14155 803 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 CYTH1Q15438 398 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ATF7IP2Q5U623 682 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 DTX3LQ8TDB6 740 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 UNKQ9C0B0 810 aaKnown RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 HAUS5O94927 633 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ITGB3P05106 788 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 DMC1Q14565 340 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 PMS1P54277 932 aaKnown RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 DEUP1Q05D60 604 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 EPHA7Q15375 998 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 NPHS2Q9NP85 383 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 C20orf96Q9NUD7 363 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-201ENST00000370203 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 MAFGO15525 162 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 GTF2H1P32780 548 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 PDXDC1Q6P996 788 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 C16orf87Q6PH81 154 aa13.19□□□□□ -0.3
TMEM56-201ENST00000370203 EYA4O95677 639 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 NR3C2P08235 984 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 SGF29Q96ES7 293 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 PNKPQ96T60 521 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 ITIH6Q6UXX5 1313 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 DCTN3O75935 186 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 USP10Q14694 798 aaKnown RBP13.18□□□□□ -0.3
TMEM56-201ENST00000370203 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 CPA4Q9UI42 421 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 H0Y626 953 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 SOX10P56693 466 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 IER5Q5VY09 327 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 PTPRN2Q92932 1015 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
TMEM56-201ENST00000370203 LRRC1Q9BTT6 524 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 SMARCAD1Q9H4L7 1026 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 TASP1Q9H6P5 420 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
TMEM56-201ENST00000370203 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 NDUFS3O75489 264 aa13.18□□□□□ -0.3
TMEM56-201ENST00000370203 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
TMEM56-201ENST00000370203 VCAM1P19320 739 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms