RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 BRD9Q9H8M2 597 aa16.97■□□□□ 0.31
SSR4-204ENST00000370087 LMAN1LQ9HAT1 526 aa16.97■□□□□ 0.31
SSR4-204ENST00000370087 ZNF334Q9HCZ1 680 aaPredicted RBP16.97■□□□□ 0.31
SSR4-204ENST00000370087 FRYQ5TBA9 3013 aa16.97■□□□□ 0.31
SSR4-204ENST00000370087 HRO43593 1189 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 MED24O75448 989 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 PTPN2P17706 415 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 GDI1P31150 447 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 VIPR2P41587 438 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 TXKP42681 527 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 RBM25P49756 843 aaKnown RBP16.96■□□□□ 0.31
SSR4-204ENST00000370087 TMEM132AQ24JP5 1023 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 NT5DC1Q5TFE4 455 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
SSR4-204ENST00000370087 RTL10Q7L3V2 364 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 FAM3CQ92520 227 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 MTMR9Q96QG7 549 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 TRMT61BQ9BVS5 477 aaKnown RBP16.96■□□□□ 0.31
SSR4-204ENST00000370087 POLD4Q9HCU8 107 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 SEMA4GQ9NTN9 838 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 C2orf42Q9NWW7 574 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 RALYQ9UKM9 306 aaKnown RBP16.96■□□□□ 0.31
SSR4-204ENST00000370087 PIAS3Q9Y6X2 628 aa16.96■□□□□ 0.31
SSR4-204ENST00000370087 GREB1Q4ZG55 1949 aa16.96■□□□□ 0.3
SSR4-204ENST00000370087 CHURC1-FNTBB4DL54 471 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ACKR2O00590 384 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ABLIM3O94929 683 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 LRG1P02750 347 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 RETP07949 1114 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 CHRNB1P11230 501 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 GJA1P17302 382 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ATP2B1P20020 1258 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 FNTBP49356 437 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ARPP19P56211 112 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 MAPK6Q16659 721 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 MAMSTRQ6ZN01 415 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 PRR23CQ6ZRP0 262 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ANKS3Q6ZW76 656 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 CELF5Q8N6W0 485 aaKnown RBP16.95■□□□□ 0.3
SSR4-204ENST00000370087 CEP120Q8N960 986 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ZNF461Q8TAF7 563 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 RSPRY1Q96DX4 576 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 TMEM60Q9H2L4 133 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 ZFP14Q9HCL3 533 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 RAB23Q9ULC3 237 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 INSL5Q9Y5Q6 135 aa16.95■□□□□ 0.3
SSR4-204ENST00000370087 CITO14578 2027 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 ARNTLO00327 626 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 MAN2B1O00754 1011 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 PRRG1O14668 218 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 NEMFO60524 1076 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 FDPSP14324 419 aaKnown RBP16.94■□□□□ 0.3
SSR4-204ENST00000370087 KRT2P35908 639 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 CCR3P51677 355 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 NRLP54845 237 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 MCPH1Q8NEM0 835 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 ADPGKQ9BRR6 497 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 C2orf40Q9H1Z8 148 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 CYP4F11Q9HBI6 524 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 RBM12Q9NTZ6 932 aaKnown RBP16.94■□□□□ 0.3
SSR4-204ENST00000370087 TPCN1Q9ULQ1 816 aa16.94■□□□□ 0.3
SSR4-204ENST00000370087 NUP210Q8TEM1 1887 aaPredicted RBP16.93■□□□□ 0.3
SSR4-204ENST00000370087 SMIM28A0A1B0GU29 152 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 K7ESF4 209 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 CDKL5O76039 1030 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 KCNA4P22459 653 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 CCNE1P24864 410 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 SOX9P48436 509 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 SIM2Q14190 667 aaPredicted RBP16.93■□□□□ 0.3
SSR4-204ENST00000370087 CSRP2Q16527 193 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 DCAF4L1Q3SXM0 396 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 Q6ZS52 159 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 TCEAL8Q8IYN2 117 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 TMEM130Q8N3G9 435 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 SMARCD2Q92925 531 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 IRF7Q92985 503 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 UROC1Q96N76 676 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 ZMAT2Q96NC0 199 aaKnown RBP16.93■□□□□ 0.3
SSR4-204ENST00000370087 IER2Q9BTL4 223 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 TM6SF1Q9BZW5 370 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 CEP72Q9P209 647 aa16.93■□□□□ 0.3
SSR4-204ENST00000370087 ORC3Q9UBD5 711 aaPredicted RBP16.93■□□□□ 0.3
SSR4-204ENST00000370087 LAMA1P25391 3075 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 EML5Q05BV3 1969 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 MEFVO15553 781 aaPredicted RBP16.92■□□□□ 0.3
SSR4-204ENST00000370087 PFKFB2O60825 505 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 LRP3O75074 770 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 REC8O95072 547 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 NEFLP07196 543 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSR4-204ENST00000370087 ATF2P15336 505 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 XBP1P17861 261 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 PSMC3P17980 439 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 FOSBP53539 338 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 ATF7IP2Q5U623 682 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 PADI6Q6TGC4 694 aa16.92■□□□□ 0.3
SSR4-204ENST00000370087 PDZD4Q76G19 769 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms