RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 ADAT2Q7Z6V5 191 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 PLEKHO2Q8TD55 490 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 FAM213AQ9BRX8 229 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 TRIM31Q9BZY9 425 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 TMEM8AQ9HCN3 771 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 SNX12Q9UMY4 172 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 GMNCA6NCL1 334 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 EXTL3O43909 919 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 ZNF467Q7Z7K2 595 aaPredicted RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 OSBPL9Q96SU4 736 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 NOVA2Q9UNW9 492 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 MYH10P35580 1976 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 TLDC2A0PJX2 215 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 ADCY3O60266 1144 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 HBP1O60381 514 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 FTCDO95954 541 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 LDHAP00338 332 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 EFNA5P52803 228 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 MXD4Q14582 209 aaPredicted RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 PLCB4Q15147 1175 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 NAB2Q15742 525 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 ALKBH5Q6P6C2 394 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 DNAAF5Q86Y56 855 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 KIF2BQ8N4N8 673 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 PRPF31Q8WWY3 499 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 PSPC1Q8WXF1 523 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 LBHD1Q9BQE6 289 aaPredicted RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 CCDC113Q9H0I3 377 aa10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 AGO2Q9UKV8 859 aaKnown RBP10.69□□□□□ -0.7
PRPF38B-203ENST00000370025 PLXNA1Q9UIW2 1896 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 PLXNB2O15031 1838 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 GH1P01241 217 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 PIGRP01833 764 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 SLC8A1P32418 973 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 ALS2CLQ60I27 953 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 GPR142Q7Z601 462 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 ATP6V1G3Q96LB4 118 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 NAGPAQ9UK23 515 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 STYXL1Q9Y6J8 313 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 DLATP10515 647 aaKnown RBP10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 CAPSQ13938 189 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 EMBQ6PCB8 327 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 KDM7AQ6ZMT4 941 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 ZBTB8OSQ8IWT0 167 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 UHMK1Q8TAS1 419 aaKnown RBP10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 FNBP1Q96RU3 617 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 ERAP1Q9NZ08 941 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 USP20Q9Y2K6 914 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 MAPK4P31152 587 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 CTNNA1P35221 906 aaKnown RBP10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 IFNAR2P48551 515 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 BZW1Q7L1Q6 419 aaKnown RBP10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 PLEKHH3Q7Z736 793 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 TAX1BP1Q86VP1 789 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 SPATS2Q86XZ4 545 aaKnown RBP10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 CEP120Q8N960 986 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 FBXL13Q8NEE6 735 aa10.68□□□□□ -0.7
PRPF38B-203ENST00000370025 FOXN3O00409 490 aaPredicted RBP10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 MYZAPP0CAP1 466 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 TNFAIP3P21580 790 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 MFAP3P55082 362 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 HUNKP57058 714 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 IFI16Q16666 785 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 TAPT1Q6NXT6 567 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 CCDC63Q8NA47 563 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 POP1Q99575 1024 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 SH3GL3Q99963 347 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 SELENOSQ9BQE4 189 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 TARS2Q9BW92 718 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 GOLPH3Q9H4A6 298 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 SLC5A4Q9NY91 659 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 COQ4Q9Y3A0 265 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 SH3BP1Q9Y3L3 701 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 A8MUI8 341 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 LRRN2O75325 713 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 H2AFZP0C0S5 128 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 SRGAP2CP0DJJ0 459 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 KLRC1P26715 233 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 ARHGAP1Q07960 439 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 TFDP1Q14186 410 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 H2AFVQ71UI9 128 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 ARHGEF19Q8IW93 802 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 IFT20Q8IY31 132 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 U2AF1L4Q8WU68 220 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 NT5C1BQ96P26 610 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 PTPN18Q99952 460 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 MSTO1Q9BUK6 570 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 C2orf40Q9H1Z8 148 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 ETAA1Q9NY74 926 aa10.67□□□□□ -0.7
PRPF38B-203ENST00000370025 IGKV6-21A0A0C4DH24 114 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 BTNL10A8MVZ5 291 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms