RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SLC10A6Q3KNW5 377 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 ALKBH5Q6P6C2 394 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 SERINC5Q86VE9 423 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 SESTD1Q86VW0 696 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 ZNF710Q8N1W2 664 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 HMX1Q9NP08 348 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 NENFQ9UMX5 172 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 NUB1Q9Y5A7 615 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 TRPV2Q9Y5S1 764 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 CDY2AQ9Y6F7 541 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 BRCA2P51587 3418 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 ASS1P00966 412 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 AXLP30530 894 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 ACLYP53396 1101 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 MYL6P60660 151 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 POU5F1Q01860 360 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 TRPC3Q13507 836 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 CUL2Q13617 745 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 RSPH3Q86UC2 560 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 EPS8L1Q8TE68 723 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 SECISBP2LQ93073 1101 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 CCDC94Q9BW85 323 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 ASB7Q9H672 318 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 ACP6Q9NPH0 428 aa18.07■□□□□ 0.48
PHGDH-202ENST00000369409 SEPT11Q9NVA2 429 aaKnown RBP18.07■□□□□ 0.48
PHGDH-202ENST00000369409 SGPL1O95470 568 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 NAB2Q15742 525 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 SLC47A2Q86VL8 602 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 FAM228AQ86W67 206 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 DNAAF5Q86Y56 855 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 TMEM130Q8N3G9 435 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 SLC30A5Q8TAD4 765 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 AGPAT1Q99943 283 aa18.06■□□□□ 0.48
PHGDH-202ENST00000369409 TRIM6Q9C030 488 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-202ENST00000369409 TNFAIP3P21580 790 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 TBXAS1P24557 533 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 ITGA7Q13683 1181 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 TMEM132DQ14C87 1099 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 PTGISQ16647 500 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 ZNF699Q32M78 642 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 C10orf76Q5T2E6 689 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 NOP9Q86U38 636 aaKnown RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 PALB2Q86YC2 1186 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 NXF3Q9H4D5 531 aaKnown RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 SNTG2Q9NY99 539 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 NOCTQ9UK39 431 aaKnown RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 NOC2LQ9Y3T9 749 aaKnown RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 HES2Q9Y543 173 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 URI1O94763 535 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 KRT19P08727 400 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 PDE6CP51160 858 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 LHX8Q68G74 356 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 RPUSD2Q8IZ73 545 aaKnown RBP18.05■□□□□ 0.48
PHGDH-202ENST00000369409 C1orf127Q8N9H9 656 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 SH3TC2Q8TF17 1288 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 SIX4Q9UIU6 781 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 SALL4Q9UJQ4 1053 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 CAPN6Q9Y6Q1 641 aa18.05■□□□□ 0.48
PHGDH-202ENST00000369409 FAM170AA1A519 330 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 CABYRO75952 493 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 MOCS3O95396 460 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 APOL6Q9BWW8 343 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 SENP6Q9GZR1 1112 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-202ENST00000369409 NIF3L1Q9GZT8 377 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 XYLT2Q9H1B5 865 aa18.04■□□□□ 0.48
PHGDH-202ENST00000369409 MOXD2PA6NHM9 499 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 TMCO5BA8MYB1 307 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 ATP8B3O60423 1300 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 ITGB3P05106 788 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 CYP11B1P15538 503 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 ACO1P21399 889 aaKnown RBP18.03■□□□□ 0.48
PHGDH-202ENST00000369409 UBXN11Q5T124 520 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 KIF12Q96FN5 646 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 SNX27Q96L92 541 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 GLT1D1Q96MS3 346 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 NAPGQ99747 312 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-202ENST00000369409 BEGAINQ9BUH8 593 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 TRMT13Q9NUP7 481 aaKnown RBP18.03■□□□□ 0.48
PHGDH-202ENST00000369409 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 CTAGE9A4FU28 777 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 BUB1O43683 1085 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 RECQL4O94761 1208 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 CALCAP01258 141 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 CHRNA1P02708 482 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 CHRNB2P17787 502 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 THPOP40225 353 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 GUCY2FP51841 1108 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 YARSP54577 528 aaKnown RBP18.03■□□□□ 0.48
PHGDH-202ENST00000369409 MGAT3Q09327 533 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 SCARA5Q6ZMJ2 495 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 RPAINQ86UA6 219 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 MYRIPQ8NFW9 859 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.485e-8■■□□□ 14.4
PHGDH-202ENST00000369409 CXCL16Q9H2A7 254 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 TAS2R14Q9NYV8 317 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
PHGDH-202ENST00000369409 PCDHB4Q9Y5E5 795 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms