RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 C1orf54Q8WWF1 131 aa19■□□□□ 0.63
CHTOP-201ENST00000368686 SKA1Q96BD8 255 aa19■□□□□ 0.63
CHTOP-201ENST00000368686 NMD3Q96D46 503 aaKnown RBP19■□□□□ 0.63
CHTOP-201ENST00000368686 C9orf72Q96LT7 481 aa19■□□□□ 0.63
CHTOP-201ENST00000368686 SLX1AQ9BQ83 275 aa19■□□□□ 0.63
CHTOP-201ENST00000368686 POLR3CQ9BUI4 534 aaPredicted RBP19■□□□□ 0.63
CHTOP-201ENST00000368686 TRIM55Q9BYV6 548 aa19■□□□□ 0.63
CHTOP-201ENST00000368686 EDIL3O43854 480 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 CIB2O75838 187 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 FTLP02792 175 aaPredicted RBP18.99■□□□□ 0.63
CHTOP-201ENST00000368686 HNRNPCP07910 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHTOP-201ENST00000368686 ADCY8P40145 1251 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 DDB1Q16531 1140 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 PRUNE1Q86TP1 453 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 RFWD2Q8NHY2 731 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 CCDC110Q8TBZ0 833 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 FAM161BQ96MY7 647 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 TMEM47Q9BQJ4 181 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 GPAMQ9HCL2 828 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 PAIP2BQ9ULR5 123 aaKnown RBP18.99■□□□□ 0.63
CHTOP-201ENST00000368686 MTO1Q9Y2Z2 717 aaKnown RBP18.99■□□□□ 0.63
CHTOP-201ENST00000368686 TYROBPO43914 113 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 TSPY3P0CV98 308 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 TSPY8P0CW00 308 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 SMARCA1P28370 1054 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 HOXD13P35453 343 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 CASP4P49662 377 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 CDK16Q00536 496 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 ZBTB16Q05516 673 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 TMEM62Q0P6H9 643 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 MED21Q13503 144 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 P3H1Q32P28 736 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 LVRNQ6Q4G3 990 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 B3GNT6Q6ZMB0 384 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHTOP-201ENST00000368686 FOXP3Q9BZS1 431 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 EBF3Q9H4W6 596 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 NIP7Q9Y221 180 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHTOP-201ENST00000368686 SH3GLB1Q9Y371 365 aa18.99■□□□□ 0.63
CHTOP-201ENST00000368686 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 USP17L3A6NCW0 530 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 USP17L4A6NCW7 530 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 POTECB2RU33 542 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 MARCH6O60337 910 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 HARSP12081 509 aaKnown RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 GCAP28676 217 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 GRIA2P42262 883 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 ARFIP2P53365 341 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 ASPHQ12797 758 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 MPP3Q13368 585 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 CYLC2Q14093 348 aaPredicted RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 PKN2Q16513 984 aaKnown RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 FAM91A1Q658Y4 838 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 USP17L1Q7RTZ2 530 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 SATL1Q86VE3 508 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 C4orf33Q8N1A6 199 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 NSUN4Q96CB9 384 aaKnown RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 SSU72Q9NP77 194 aaKnown RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 TIMMDC1Q9NPL8 285 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 MCM9Q9NXL9 1143 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 PCDHA12Q9UN75 941 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 ASTN1O14525 1302 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 A0A0G2JND7 137 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 CLDN3O15551 220 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 FGFR1P11362 822 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 GYG1P46976 350 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 ADCY7P51828 1080 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 ADARP55265 1226 aaKnown RBP18.98■□□□□ 0.63
CHTOP-201ENST00000368686 BMT2Q1RMZ1 405 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 TBC1D9BQ66K14 1250 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 ADGRG6Q86SQ4 1221 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 LRRC6Q86X45 466 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 OR6Y1Q8NGX8 325 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 HAS1Q92839 578 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 PWWP2AQ96N64 755 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 PCDH18Q9HCL0 1135 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 CLIC5Q9NZA1 410 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 STX8Q9UNK0 236 aa18.98■□□□□ 0.63
CHTOP-201ENST00000368686 MAGEA4P43358 317 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 ACTR3P61158 418 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 TRIP13Q15645 432 aaPredicted RBP18.97■□□□□ 0.63
CHTOP-201ENST00000368686 MAPK6Q16659 721 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 ARSHQ5FYA8 562 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 PDSS2Q86YH6 399 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 PPCSQ9HAB8 311 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 PICK1Q9NRD5 415 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 APEX2Q9UBZ4 518 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 DDX25Q9UHL0 483 aaKnown RBP18.97■□□□□ 0.63
CHTOP-201ENST00000368686 PCDHB13Q9Y5F0 798 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 FAM170AA1A519 330 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 OATP04181 439 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 RFX1P22670 979 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 FMO5P49326 533 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 SLC12A3P55017 1021 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 RPL26P61254 145 aaKnown RBP18.97■□□□□ 0.63
CHTOP-201ENST00000368686 TMCO4Q5TGY1 634 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 CYP4F22Q6NT55 531 aa18.97■□□□□ 0.63
CHTOP-201ENST00000368686 RIPOR1Q6ZS17 1223 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms