RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 APOBEC3GQ9HC16 384 aaKnown RBP18.7■□□□□ 0.58
LMNA-205ENST00000368299 AVENQ9NQS1 362 aaPredicted RBP18.7■□□□□ 0.58
LMNA-205ENST00000368299 CNOT8Q9UFF9 292 aaKnown RBP18.7■□□□□ 0.58
LMNA-205ENST00000368299 C22orf31O95567 290 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 LGALS2P05162 132 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 POTEJP0CG39 1038 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 DUOXA2Q1HG44 320 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 ATF7IP2Q5U623 682 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 WHAMMQ8TF30 809 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 TRAPPC12Q8WVT3 735 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 NLRP4Q96MN2 994 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 PTPRHQ9HD43 1115 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 PCDHB4Q9Y5E5 795 aa18.7■□□□□ 0.58
LMNA-205ENST00000368299 INO80B-WBP1J3KQ70 363 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 CYP1A1P04798 512 aaPredicted RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 COMTP21964 271 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 TNFSF9P41273 254 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 CARSP49589 748 aaKnown RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 SEZ6Q53EL9 994 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 MAMDC4Q6UXC1 1216 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 BRI3BPQ8WY22 251 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 RNPEPQ9H4A4 650 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 CWC15Q9P013 229 aaKnown RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 GOLGA6BA6NDN3 693 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 ATMINO43313 823 aaPredicted RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 ASS1P00966 412 aaKnown RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 NSFP46459 744 aaKnown RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 CENPCQ03188 943 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 TMEM270Q6UE05 265 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 MCOLN2Q8IZK6 566 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 IFT81Q8WYA0 676 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 ALG3Q92685 438 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 DDX47Q9H0S4 455 aaKnown RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 PRMT7Q9NVM4 692 aaPredicted RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.69■□□□□ 0.58
LMNA-205ENST00000368299 NFU1Q9UMS0 254 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 NUB1Q9Y5A7 615 aa18.69■□□□□ 0.58
LMNA-205ENST00000368299 COL1A2P08123 1366 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 FAM170AA1A519 330 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 CAPN2P17655 700 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 PHKA2P46019 1235 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 CLCN3P51790 818 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 MBTD1Q05BQ5 628 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 SGSM1Q2NKQ1 1148 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 ZNF568Q3ZCX4 644 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 ALS2CLQ60I27 953 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 CASKIN2Q8WXE0 1202 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 CD101Q93033 1021 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 PARK7Q99497 189 aaKnown RBP18.68■□□□□ 0.58
LMNA-205ENST00000368299 GBA2Q9HCG7 927 aaPredicted RBP18.68■□□□□ 0.58
LMNA-205ENST00000368299 TNFSF13BQ9Y275 285 aa18.68■□□□□ 0.58
LMNA-205ENST00000368299 ESYT3A0FGR9 886 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 TMEM110-MUSTN1A8MSY1 372 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 SPOPO43791 374 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 PPFIA4O75335 1185 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 RPS6KA5O75582 802 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 INSRRP14616 1297 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 CTNNA2P26232 953 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 GNA15P30679 374 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 CTNNA1P35221 906 aaKnown RBP18.67■□□□□ 0.58
LMNA-205ENST00000368299 FAM187BQ17R55 369 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 TMEM132AQ24JP5 1023 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 LEKR1Q6ZMV7 388 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 VCPIP1Q96JH7 1222 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 PLXNA1Q9UIW2 1896 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 ZSCAN5CA6NGD5 496 aaPredicted RBP18.67■□□□□ 0.58
LMNA-205ENST00000368299 BHMG1C9JSJ3 638 aaPredicted RBP18.67■□□□□ 0.58
LMNA-205ENST00000368299 B4GALT4O60513 344 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 ITGA4P13612 1032 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 PEX5P50542 639 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 SEL1L2Q5TEA6 688 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 IFNLR1Q8IU57 520 aaPredicted RBP18.67■□□□□ 0.58
LMNA-205ENST00000368299 MREGQ8N565 214 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 RBBP8NLQ8NC74 664 aaPredicted RBP18.67■□□□□ 0.58
LMNA-205ENST00000368299 MTMR12Q9C0I1 747 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 PCDHA3Q9Y5H8 950 aa18.67■□□□□ 0.58
LMNA-205ENST00000368299 SYF2O95926 243 aaKnown RBP18.66■□□□□ 0.58
LMNA-205ENST00000368299 TMOD1P28289 359 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 TRPC3Q13507 836 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 DPP9Q86TI2 863 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 C2orf69Q8N8R5 385 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 PLVAPQ9BX97 442 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 KATNBL1Q9H079 304 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 CHORDC1Q9UHD1 332 aaPredicted RBP18.66■□□□□ 0.58
LMNA-205ENST00000368299 IL18RAPO95256 599 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 POU5F1Q01860 360 aaKnown RBP18.66■□□□□ 0.58
LMNA-205ENST00000368299 GRB14Q14449 540 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 LIN9Q5TKA1 542 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 GPR142Q7Z601 462 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 AFG1LQ8WV93 481 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 KRT35Q92764 455 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 FAM212AQ96EL1 285 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 NIF3L1Q9GZT8 377 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.66■□□□□ 0.58
LMNA-205ENST00000368299 AMACRQ9UHK6 382 aa18.66■□□□□ 0.58
LMNA-205ENST00000368299 RNF40O75150 1001 aa18.65■□□□□ 0.58
LMNA-205ENST00000368299 CST3P01034 146 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms