RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 MFSD14AQ96MC6 490 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 RBSNQ9H1K0 784 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 GOLGA2P5Q9HBQ8 144 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 CACNG4Q9UBN1 327 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 PPP1R3GB7ZBB8 358 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 F8W810 466 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 MAPK13O15264 365 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 EXOC3O60645 756 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 KIF4AO95239 1232 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 NFICP08651 508 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 CD44P16070 742 aaKnown RBP20.24■□□□□ 0.83
LMNA-204ENST00000368298 ERVFC1P60507 584 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 STIM1Q13586 685 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 TMEM132DQ14C87 1099 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 ISM2Q6H9L7 571 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 CD300LGQ6UXG3 332 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 RBM43Q6ZSC3 357 aaKnown RBP20.24■□□□□ 0.83
LMNA-204ENST00000368298 EFCAB13Q8IY85 973 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 NGRNQ9NPE2 291 aaKnown RBP20.24■□□□□ 0.83
LMNA-204ENST00000368298 TUBGCP4Q9UGJ1 667 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 IRAK3Q9Y616 596 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 PRRC2BQ5JSZ5 2229 aaKnown RBP20.24■□□□□ 0.83
LMNA-204ENST00000368298 BIN1O00499 593 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 PSMA7O14818 248 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 RPL13P26373 211 aaKnown RBP20.24■□□□□ 0.83
LMNA-204ENST00000368298 MCCD1P59942 119 aaPredicted RBP20.24■□□□□ 0.83
LMNA-204ENST00000368298 PSMD6Q15008 389 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 GPR65Q8IYL9 337 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 BEST2Q8NFU1 509 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 RABGGTAQ92696 567 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 ZBP1Q9H171 429 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 PDE11AQ9HCR9 933 aa20.24■□□□□ 0.83
LMNA-204ENST00000368298 ANO9A1A5B4 782 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 PODXLO00592 558 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 TADA2AO75478 443 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 B3GAT3O94766 335 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 SOD2P04179 222 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 CTSAP10619 480 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 CCNE1P24864 410 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 LRRC63Q05C16 580 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 CYP24A1Q07973 514 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 TIGD5Q53EQ6 642 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 FUT10Q6P4F1 479 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 ZC3H3Q8IXZ2 948 aaKnown RBP20.23■□□□□ 0.83
LMNA-204ENST00000368298 RDH13Q8NBN7 331 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 C3orf58Q8NDZ4 430 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 GPR62Q9BZJ7 368 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 CHST7Q9NS84 486 aa20.23■□□□□ 0.83
LMNA-204ENST00000368298 SF3B1O75533 1304 aaKnown RBP eCLIP20.22■□□□□ 0.833e-6■■■■■ 137.9
LMNA-204ENST00000368298 PAX3P23760 479 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 NR2F2P24468 414 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 IRS1P35568 1242 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 CLDN10P78369 228 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 ELAVL2Q12926 359 aaKnown RBP20.22■□□□□ 0.83
LMNA-204ENST00000368298 ADAM9Q13443 819 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 ANKRD40Q6AI12 368 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 MRPL43Q8N983 215 aaKnown RBP20.22■□□□□ 0.83
LMNA-204ENST00000368298 NOC3LQ8WTT2 800 aaKnown RBP20.22■□□□□ 0.83
LMNA-204ENST00000368298 CACTINQ8WUQ7 758 aaKnown RBP20.22■□□□□ 0.83
LMNA-204ENST00000368298 TCF25Q9BQ70 676 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 HERC2P3Q9BVR0 1158 aa20.22■□□□□ 0.83
LMNA-204ENST00000368298 NSUN3Q9H649 340 aaKnown RBP20.22■□□□□ 0.83
LMNA-204ENST00000368298 PIRO00625 290 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 IGFBP6P24592 240 aaPredicted RBP20.21■□□□□ 0.83
LMNA-204ENST00000368298 CASP4P49662 377 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 PMS1P54277 932 aaKnown RBP20.21■□□□□ 0.83
LMNA-204ENST00000368298 ENPEPQ07075 957 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 BMS1Q14692 1282 aaKnown RBP20.21■□□□□ 0.83
LMNA-204ENST00000368298 TAS1R1Q7RTX1 841 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 TMC7Q7Z402 723 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 MKNK1Q9BUB5 465 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 INTS13Q9NVM9 706 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 DPP3Q9NY33 737 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 FRMD4BQ9Y2L6 1034 aa20.21■□□□□ 0.83
LMNA-204ENST00000368298 TRAPPC3O43617 180 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 LILRB3O75022 631 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.82
LMNA-204ENST00000368298 FKBP3Q00688 224 aaKnown RBP20.2■□□□□ 0.82
LMNA-204ENST00000368298 SMC1AQ14683 1233 aaKnown RBP20.2■□□□□ 0.82
LMNA-204ENST00000368298 USP41Q3LFD5 358 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 KIAA0319Q5VV43 1072 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 MLKLQ8NB16 471 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 CXorf38Q8TB03 319 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 TMC2Q8TDI7 906 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 MICAL1Q8TDZ2 1067 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 PARD3BQ8TEW8 1205 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 TSG101Q99816 390 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 SSX2IPQ9Y2D8 614 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 MYO7AQ13402 2215 aa20.2■□□□□ 0.82
LMNA-204ENST00000368298 C2orf71A6NGG8 1288 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 AKAP3O75969 853 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 PSMC2P35998 433 aaKnown RBP20.19■□□□□ 0.82
LMNA-204ENST00000368298 GUCY2FP51841 1108 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 DSG1Q02413 1049 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 C9orf57Q5W0N0 161 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 TTI2Q6NXR4 508 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 HASPINQ8TF76 798 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 CGRRF1Q99675 332 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms