RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 GOLGA8OA6NCC3 632 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 GOLGA8NF8WBI6 632 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 PGK1P00558 417 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 AKT1P31749 480 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 ETF1P62495 437 aaKnown RBP11.37□□□□□ -0.59
PTPRK-205ENST00000368213 DR1Q01658 176 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 ROR1Q01973 937 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 CNTN2Q02246 1040 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 TRPV2Q9Y5S1 764 aa11.37□□□□□ -0.59
PTPRK-205ENST00000368213 A6NNZ2 444 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 OGTO15294 1046 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.595e-7■■□□□ 12
PTPRK-205ENST00000368213 TUBB8Q3ZCM7 444 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 PRAMEF19Q5SWL8 479 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 GJC2Q5T442 439 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-205ENST00000368213 CXCL17Q6UXB2 119 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 PID1Q7Z2X4 250 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 SPATA17Q96L03 361 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 EIF3DO15371 548 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPRK-205ENST00000368213 XYLBO75191 536 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 FGGP02679 453 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 NCAM1P13591 858 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 SEZ6Q53EL9 994 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 CES5AQ6NT32 575 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 RIOX2Q8IUF8 465 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 ZFPM1Q8IX07 1006 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 SCFD1Q8WVM8 642 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 FBXW4P57775 412 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 PLD1Q13393 1074 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 SHC4Q6S5L8 630 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 ULK4Q96C45 1275 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 TSSK1BQ9BXA7 367 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 PDE11AQ9HCR9 933 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 MROH7Q68CQ1 1323 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 MYMKA6NI61 221 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 CCL23P55773 120 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 E2F5Q15329 346 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 DCAF6Q58WW2 860 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 RHOT1Q8IXI2 618 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 ATP6V0D2Q8N8Y2 350 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 UBA3Q8TBC4 463 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 RABEP2Q9H5N1 569 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 SYNCRIPO60506 623 aaKnown RBP11.36□□□□□ -0.59
PTPRK-205ENST00000368213 MFAP3LO75121 409 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 AP1G2O75843 785 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 TWF1Q12792 350 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 TROAPQ12815 778 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 TRIM42Q8IWZ5 723 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
PTPRK-205ENST00000368213 GAS2L1Q99501 681 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-205ENST00000368213 DRC3Q9H069 523 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 CATSPERBQ9H7T0 1116 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
PTPRK-205ENST00000368213 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
PTPRK-205ENST00000368213 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 EEF2KO00418 725 aaKnown RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TTI1O43156 1089 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 RRP9O43818 475 aaKnown RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ZNF189O75820 626 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ACADMP11310 421 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 CKBP12277 381 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ARL4CP56559 192 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 GFPT1Q06210 699 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ARMC6Q6NXE6 501 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 REPS2Q8NFH8 660 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 VCXQ9H320 206 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 GPRC5CQ9NQ84 441 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 CLCA2Q9UQC9 943 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ATP8A1Q9Y2Q0 1164 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TOM1L1O75674 476 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 GRK4P32298 578 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 FLT3LGP49771 235 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 MEI1Q5TIA1 1274 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ANGPTL8Q6UXH0 198 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 SRRM1Q8IYB3 904 aaKnown RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TBC1D19Q8N5T2 526 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 AGPAT1Q99943 283 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 BFARQ9NZS9 450 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ARHGAP42A6NI28 874 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 SLC37A4O43826 429 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 GRAP2O75791 330 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ATXN3P54252 364 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 EFHC1Q5JVL4 640 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 PPM1LQ5SGD2 360 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TTC8Q8TAM2 541 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 NEURL4Q96JN8 1562 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms