RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 FIGNQ5HY92 759 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 FAM47EQ6ZV65 393 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 EPM2AIP1Q7L775 607 aaPredicted RBP14□□□□□ -0.17
PTPRK-204ENST00000368210 ATL2Q8NHH9 583 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 CPA5Q8WXQ8 436 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 DNAJC9Q8WXX5 260 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 STAP1Q9ULZ2 295 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 KRT38O76015 456 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 RWDD4Q6NW29 188 aaKnown RBP14□□□□□ -0.17
PTPRK-204ENST00000368210 SEMA6BQ9H3T3 888 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 TMEM8AQ9HCN3 771 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 ABT1Q9ULW3 272 aaKnown RBP14□□□□□ -0.17
PTPRK-204ENST00000368210 PCDHB2Q9Y5E7 798 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 COPEO14579 308 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 DNAJC6O75061 913 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 KRT3P12035 628 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 KLHL38Q2WGJ6 581 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 C4orf50Q6ZRC1 276 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 WDR75Q8IWA0 830 aaKnown RBP14□□□□□ -0.17
PTPRK-204ENST00000368210 TTC17Q96AE7 1141 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 OPTNQ96CV9 577 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 ANLNQ9NQW6 1124 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
PTPRK-204ENST00000368210 IGSF9BQ9UPX0 1349 aa14□□□□□ -0.17
PTPRK-204ENST00000368210 GOLGA8CPA6NN73 597 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 KRT10P13645 584 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 KPNA2P52292 529 aaKnown RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 MAP3K7CLP57077 242 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 KYAT1Q16773 422 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 HP1BP3Q5SSJ5 553 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 DCLK2Q8N568 766 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 MRPL46Q9H2W6 279 aaKnown RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 SMARCAD1Q9H4L7 1026 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 MLXIPLQ9NP71 852 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 INPP5FQ9Y2H2 1132 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 SHPRHQ149N8 1683 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 A0A087X0T9 212 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 FAM228BP0C875 321 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 PECAM1P16284 738 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 ATG16L1Q676U5 607 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 SPOPLQ6IQ16 392 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 RBBP8NLQ8NC74 664 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 C18orf8Q96DM3 657 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 MAML3Q96JK9 1138 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 ANKRD27Q96NW4 1050 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 UBAP1Q9NZ09 502 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 MID2Q9UJV3 735 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 CDH6P55285 790 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 GUCY1A3Q02108 690 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 PDIA2Q13087 525 aaKnown RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 GJB7Q6PEY0 223 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 RDM1Q8NG50 284 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 ACAP3Q96P50 834 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 GYG2O15488 501 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 PDE5AO76074 875 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 SARSP49591 514 aaKnown RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 ZBED8Q8IZ13 594 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 TRIM51Q9BSJ1 452 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 PARVBQ9HBI1 364 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 CNGB3Q9NQW8 809 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 TMX2Q9Y320 296 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 ALG6Q9Y672 507 aa13.99□□□□□ -0.17
PTPRK-204ENST00000368210 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.99□□□□□ -0.17
PTPRK-204ENST00000368210 POLRMTO00411 1230 aaKnown RBP13.98□□□□□ -0.17
PTPRK-204ENST00000368210 SKAP2O75563 359 aaPredicted RBP13.98□□□□□ -0.17
PTPRK-204ENST00000368210 HLA-DRAP01903 254 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 RFC5P40937 340 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 SLC16A10Q8TF71 515 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GOLPH3Q9H4A6 298 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 NAGPAQ9UK23 515 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GOLGA8QA0A0J9YX86 632 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GOLGA8OA6NCC3 632 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GOLGA8NF8WBI6 632 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 PI4K2BG5E9Z4 385 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 ARHGEF9O43307 516 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GIT2Q14161 759 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 SGSM1Q2NKQ1 1148 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 MAML1Q92585 1016 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 CYTH2Q99418 400 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 SHMT1P34896 483 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 ARSEP51690 589 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 TMPRSS15P98073 1019 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 PRPF31Q8WWY3 499 aaKnown RBP13.98□□□□□ -0.17
PTPRK-204ENST00000368210 GPRASP2Q96D09 838 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 AGAP1Q9UPQ3 857 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 PHF2O75151 1096 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 SERPINI2O75830 405 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 ESRRBO95718 433 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 NT5DC1Q5TFE4 455 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 TRIM65Q6PJ69 517 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 TRIM55Q9BYV6 548 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
PTPRK-204ENST00000368210 C10orf88Q9H8K7 445 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms