RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SMYD5Q6GMV2 418 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 RELL1Q8IUW5 271 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 RHOT1Q8IXI2 618 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 LRRC34Q8IZ02 419 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.23■□□□□ 0.03
CD48-201ENST00000368045 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
CD48-201ENST00000368045 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 XPNPEP1Q9NQW7 623 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 CYP26B1Q9NR63 512 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 STK32BQ9NY57 414 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 SCINQ9Y6U3 715 aa15.23■□□□□ 0.03
CD48-201ENST00000368045 CHUKO15111 745 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 HLA-DRAP01903 254 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 LIG4P49917 911 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 XKR3Q5GH77 459 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 SLFN12LQ6IEE8 588 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 TAS1R3Q7RTX0 852 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 EXOC3L1Q86VI1 746 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 KATNAL2Q8IYT4 538 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 UHMK1Q8TAS1 419 aaKnown RBP15.22■□□□□ 0.03
CD48-201ENST00000368045 IPO4Q8TEX9 1081 aaKnown RBP15.22■□□□□ 0.03
CD48-201ENST00000368045 SGSM3Q96HU1 749 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
CD48-201ENST00000368045 PI4K2AQ9BTU6 479 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 POLR3FQ9H1D9 316 aaPredicted RBP15.22■□□□□ 0.03
CD48-201ENST00000368045 JPH1Q9HDC5 661 aaPredicted RBP15.22■□□□□ 0.03
CD48-201ENST00000368045 CHST7Q9NS84 486 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 LGALS13Q9UHV8 139 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 ANAPC5Q9UJX4 755 aa15.22■□□□□ 0.03
CD48-201ENST00000368045 C4BPAP04003 597 aaKnown RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 VIMP08670 466 aaKnown RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 TBXAS1P24557 533 aaPredicted RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 CETN2P41208 172 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 PIK3CAP42336 1068 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 SLCO1A2P46721 670 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 ITGA8P53708 1063 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 PRKCEQ02156 737 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 LMNB2Q03252 620 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 CXCL9Q07325 125 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 STRN3Q13033 797 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 KLF1Q13351 362 aaPredicted RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 SNX1Q13596 522 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 MTMR2Q13614 643 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 UBAP2Q5T6F2 1119 aaKnown RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 SWSAP1Q6NVH7 229 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 MIS18BP1Q6P0N0 1132 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 PHF13Q86YI8 300 aaPredicted RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 CCDC89Q8N998 374 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 EXD1Q8NHP7 514 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 MAGEC3Q8TD91 643 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 ZNF516Q92618 1163 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
CD48-201ENST00000368045 PLCD4Q9BRC7 762 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 NEU2Q9Y3R4 380 aa15.21■□□□□ 0.03
CD48-201ENST00000368045 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 ZNF280AP59817 542 aaPredicted RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 PPARDQ03181 441 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 ZNF772Q68DY9 489 aaPredicted RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 CIAPIN1Q6FI81 312 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 PLEKHA7Q6IQ23 1121 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 TRMT1LQ7Z2T5 733 aaKnown RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 FUKQ8N0W3 1084 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 ABRAQ8N0Z2 381 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 REPS2Q8NFH8 660 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 CCHCR1Q8TD31 782 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 CPA5Q8WXQ8 436 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 ATG4CQ96DT6 458 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 SCLT1Q96NL6 688 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 CCDC77Q9BR77 488 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 DDX23Q9BUQ8 820 aaKnown RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 SEPT9Q9UHD8 586 aaPredicted RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 AGO2Q9UKV8 859 aaKnown RBP15.21■□□□□ 0.02
CD48-201ENST00000368045 ACTL7BQ9Y614 415 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 UMODL1Q5DID0 1318 aa15.21■□□□□ 0.02
CD48-201ENST00000368045 EP400Q96L91 3159 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 THAP12O43422 761 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 ACSL3O95573 720 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 TNNI1P19237 187 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 CHKAP35790 457 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 ADCY8P40145 1251 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 SOX10P56693 466 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 ACTR2P61160 394 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 NOMO3P69849 1222 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 CUL2Q13617 745 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 GNPTABQ3T906 1256 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 TDRD10Q5VZ19 366 aaKnown RBP15.2■□□□□ 0.02
CD48-201ENST00000368045 CYB5D1Q6P9G0 228 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 ZNF365Q70YC5 407 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 PARP9Q8IXQ6 854 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 ATG4AQ8WYN0 398 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 CCDC113Q9H0I3 377 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 AS3MTQ9HBK9 375 aa15.2■□□□□ 0.02
CD48-201ENST00000368045 ADAM22Q9P0K1 906 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms