RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 HSPA9P38646 679 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 SLC1A1P43005 524 aa15□□□□□ -0.01
USF1-202ENST00000368020 LMAN1P49257 510 aa15□□□□□ -0.01
USF1-202ENST00000368020 NLRP11P59045 1033 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 CAPSQ13938 189 aa15□□□□□ -0.01
USF1-202ENST00000368020 TFDP1Q14186 410 aa15□□□□□ -0.01
USF1-202ENST00000368020 HLTFQ14527 1009 aaKnown RBP eCLIP15□□□□□ -0.01
USF1-202ENST00000368020 ZNF792Q3KQV3 632 aa15□□□□□ -0.01
USF1-202ENST00000368020 SPDYCQ5MJ68 293 aa15□□□□□ -0.01
USF1-202ENST00000368020 CELF3Q5SZQ8 465 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 ATP8B4Q8TF62 1192 aa15□□□□□ -0.01
USF1-202ENST00000368020 GLG1Q92896 1179 aa15□□□□□ -0.01
USF1-202ENST00000368020 VCPIP1Q96JH7 1222 aa15□□□□□ -0.01
USF1-202ENST00000368020 GDAP1L1Q96MZ0 367 aa15□□□□□ -0.01
USF1-202ENST00000368020 AP1M1Q9BXS5 423 aa15□□□□□ -0.01
USF1-202ENST00000368020 FAM129AQ9BZQ8 928 aa15□□□□□ -0.01
USF1-202ENST00000368020 ZMYND15Q9H091 742 aa15□□□□□ -0.01
USF1-202ENST00000368020 MTUS1Q9ULD2 1270 aa15□□□□□ -0.01
USF1-202ENST00000368020 SPOPO43791 374 aa15□□□□□ -0.01
USF1-202ENST00000368020 SORBS3O60504 671 aa15□□□□□ -0.01
USF1-202ENST00000368020 TRPA1O75762 1119 aa15□□□□□ -0.01
USF1-202ENST00000368020 PGK2P07205 417 aa15□□□□□ -0.01
USF1-202ENST00000368020 CHRNA3P32297 505 aa15□□□□□ -0.01
USF1-202ENST00000368020 CTNNA1P35221 906 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 MORN1Q5T089 497 aa15□□□□□ -0.01
USF1-202ENST00000368020 DCAF12L1Q5VU92 463 aa15□□□□□ -0.01
USF1-202ENST00000368020 TDRD10Q5VZ19 366 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 LRIG3Q6UXM1 1119 aa15□□□□□ -0.01
USF1-202ENST00000368020 WDR49Q8IV35 697 aa15□□□□□ -0.01
USF1-202ENST00000368020 BRSK2Q8IWQ3 736 aa15□□□□□ -0.01
USF1-202ENST00000368020 MAIP1Q8WWC4 291 aa15□□□□□ -0.01
USF1-202ENST00000368020 TATDN2Q93075 761 aa15□□□□□ -0.01
USF1-202ENST00000368020 FGD4Q96M96 766 aa15□□□□□ -0.01
USF1-202ENST00000368020 TARS2Q9BW92 718 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 DDX47Q9H0S4 455 aaKnown RBP15□□□□□ -0.01
USF1-202ENST00000368020 SMARCAD1Q9H4L7 1026 aa15□□□□□ -0.01
USF1-202ENST00000368020 ANKFY1Q9P2R3 1169 aa15□□□□□ -0.01
USF1-202ENST00000368020 TRPC6Q9Y210 931 aa15□□□□□ -0.01
USF1-202ENST00000368020 TELO2Q9Y4R8 837 aa15□□□□□ -0.01
USF1-202ENST00000368020 PLXNA1Q9UIW2 1896 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 PODXLO00592 558 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 ASAP2O43150 1006 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 PHACTR2O75167 634 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 HOXC6P09630 235 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 NSFP46459 744 aaKnown RBP14.99□□□□□ -0.01
USF1-202ENST00000368020 LACTBP83111 547 aaPredicted RBP14.99□□□□□ -0.01
USF1-202ENST00000368020 CUL2Q13617 745 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 MAPK6Q16659 721 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 LIN9Q5TKA1 542 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 CRELD2Q6UXH1 353 aaPredicted RBP14.99□□□□□ -0.01
USF1-202ENST00000368020 IQCKQ8N0W5 287 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 SOCS4Q8WXH5 440 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 ZNF516Q92618 1163 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 CD101Q93033 1021 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 GPR20Q99678 358 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 CWC15Q9P013 229 aaKnown RBP14.99□□□□□ -0.01
USF1-202ENST00000368020 CALCOCO1Q9P1Z2 691 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 PARP2Q9UGN5 583 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 CNTN6Q9UQ52 1028 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 PCDHA3Q9Y5H8 950 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 MGAMO43451 1857 aa14.99□□□□□ -0.01
USF1-202ENST00000368020 IGKV6-21A0A0C4DH24 114 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 GOLGA6L10A6NI86 522 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 PHF2O75151 1096 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 RPS6KA5O75582 802 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 IVLP07476 585 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 UNGP13051 313 aaPredicted RBP14.98□□□□□ -0.01
USF1-202ENST00000368020 CAPN2P17655 700 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 COMTP21964 271 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 ACOT2P49753 483 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 DRG2P55039 364 aaKnown RBP14.98□□□□□ -0.01
USF1-202ENST00000368020 FCGRTP55899 365 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 RWDD2BP57060 319 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 DR1Q01658 176 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 SP3Q02447 781 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 CENPCQ03188 943 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 TTLL4Q14679 1199 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 MESDQ14696 234 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 MAMDC4Q6UXC1 1216 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 DPP9Q86TI2 863 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
USF1-202ENST00000368020 PRPF31Q8WWY3 499 aaKnown RBP14.98□□□□□ -0.01
USF1-202ENST00000368020 USP6NLQ92738 828 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 CNOT8Q9UFF9 292 aaKnown RBP14.98□□□□□ -0.01
USF1-202ENST00000368020 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
USF1-202ENST00000368020 ZSWIM8A7E2V4 1837 aa14.98□□□□□ -0.01
USF1-202ENST00000368020 ESYT3A0FGR9 886 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 OGTO15294 1046 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 HBP1O60381 514 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 CLTAP09496 248 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 ACTN2P35609 894 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 MRPS25P82663 173 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
USF1-202ENST00000368020 MAP2K5Q13163 448 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 PTPROQ16827 1216 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 ALG3Q92685 438 aa14.97□□□□□ -0.01
USF1-202ENST00000368020 SPATA33Q96N06 139 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms