RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
PTPN7-202ENST00000367279 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 LOC102724159A0A0B4J2E5 919 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 FSCN2O14926 492 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 ZBED4O75132 1171 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 SPAG7O75391 227 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 KRT10P13645 584 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
PTPN7-202ENST00000367279 KRT76Q01546 638 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 PWP2Q15269 919 aaKnown RBP13.13□□□□□ -0.31
PTPN7-202ENST00000367279 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 DDX1Q92499 740 aaKnown RBP13.13□□□□□ -0.31
PTPN7-202ENST00000367279 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 WHRNQ9P202 907 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
PTPN7-202ENST00000367279 LRRIQ4A6NIV6 560 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 TTC4O95801 387 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ATP5DP30049 168 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 MYCBPQ99417 103 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ZNF148Q9UQR1 794 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 SUN1O94901 812 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 TAS2R40P59535 323 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ELF3P78545 371 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 LACTB2Q53H82 288 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 PIGWQ7Z7B1 504 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 CYP4X1Q8N118 509 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 NINJ2Q9NZG7 142 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 USP15Q9Y4E8 981 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 IFNB1P01574 187 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 STRN3Q13033 797 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 MTM1Q13496 603 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 P3H1Q32P28 736 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ATG4CQ96DT6 458 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-202ENST00000367279 CCDC77Q9BR77 488 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 ECT2Q9H8V3 914 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
PTPN7-202ENST00000367279 WDR46O15213 610 aaKnown RBP13.11□□□□□ -0.31
PTPN7-202ENST00000367279 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
PTPN7-202ENST00000367279 ZNF862O60290 1169 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 SNX3O60493 162 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 GNA15P30679 374 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 SFNP31947 248 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 ITIH4Q14624 930 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-202ENST00000367279 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 P3H4Q92791 437 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 OSBPL8Q9BZF1 889 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 SAYSD1Q9NPB0 183 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 ZSCAN5DPP0CG00 497 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 GHRP10912 638 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 POLGP54098 1239 aaPredicted RBP13.11□□□□□ -0.31
PTPN7-202ENST00000367279 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
PTPN7-202ENST00000367279 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 VPS37BQ9H9H4 285 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 NOD2Q9HC29 1040 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
PTPN7-202ENST00000367279 RASA4BC9J798 803 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 GOLGA8SH3BPF8 625 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 MAPK13O15264 365 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 RASA4O43374 803 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 NR3C2P08235 984 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 KCNJ2P63252 427 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 XRCC4Q13426 336 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 VSTM1Q6UX27 236 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 C12orf50Q8NA57 414 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 MFSD14AQ96MC6 490 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms