RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MAGEC2Q9UBF1 373 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 CDV3Q9UKY7 258 aaKnown RBP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
CSNK1E-202ENST00000366216 CEP295Q9C0D2 2601 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 GPR182O15218 404 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 EIF3DO15371 548 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 HOXA2O43364 376 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 MAPTP10636 758 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 ATP4AP20648 1035 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 MSNP26038 577 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 COPB1P53618 953 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 RAD51AP2Q09MP3 1159 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 UGCGQ16739 394 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 OTUD6AQ7L8S5 288 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 GPR149Q86SP6 731 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 C1orf210Q8IVY1 113 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 ZC3H3Q8IXZ2 948 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 ABI1Q8IZP0 508 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 CCDC150Q8NCX0 1101 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 GLIS3Q8NEA6 775 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF507Q8TCN5 953 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 SLC22A17Q8WUG5 538 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 KCTD10Q9H3F6 313 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 ZHX3Q9H4I2 956 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 AZI2Q9H6S1 392 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 SFXN1Q9H9B4 322 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 DLGAP2Q9P1A6 1054 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 CA14Q9ULX7 337 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 SIT1Q9Y3P8 196 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 MYH11P35749 1972 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 UBE4BO95155 1302 aa12.26□□□□□ -0.45
CSNK1E-202ENST00000366216 IGKV6D-21A0A0A0MT36 114 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 N4BP1O75113 896 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 STBD1O95210 358 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 ADRB1P08588 477 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 KLRC1P26715 233 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 PBX1P40424 430 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 MAPK7Q13164 816 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 TBX2Q13207 712 aaPredicted RBP12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 EDRF1Q3B7T1 1238 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 SPECC1LQ69YQ0 1117 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 STXBP4Q6ZWJ1 553 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 LRRC8AQ8IWT6 810 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 BCL7CQ8WUZ0 217 aaPredicted RBP12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 CEP63Q96MT8 703 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 FGFBP2Q9BYJ0 223 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 MRPL44Q9H9J2 332 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 GABBR1Q9UBS5 961 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 TRAF3IP3Q9Y228 551 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 ITIH6Q6UXX5 1313 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 GREB1Q4ZG55 1949 aa12.25□□□□□ -0.45
CSNK1E-202ENST00000366216 ZZEF1O43149 2961 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 DCDC2BA2VCK2 349 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 LGALS16A8MUM7 142 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 PRR5-ARHGAP8B1AHC4 643 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 NT5C1B-RDH14C9J2C7 533 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 PDXKO00764 312 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 N4BP3O15049 544 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF862O60290 1169 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 HIP1RO75146 1068 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 GPR32O75388 356 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 GNA14O95837 355 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 TPM2P07951 284 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 ARHGAP8P85298 464 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 LMNB2Q03252 620 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 ALCAMQ13740 583 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 COL9A2Q14055 689 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 KNOP1Q1ED39 458 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 XKR9Q5GH70 373 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 SWSAP1Q6NVH7 229 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 SPAG17Q6Q759 2223 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 VPS52Q8N1B4 723 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 MYCT1Q8N699 235 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 CACTINQ8WUQ7 758 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 RSAD2Q8WXG1 361 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 BORCS6Q96GS4 357 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 CNOT6LQ96LI5 555 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 CCDC43Q96MW1 224 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 ZNF830Q96NB3 372 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 FIZ1Q96SL8 496 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 OSMRQ99650 979 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 RTKNQ9BST9 563 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 VN1R3Q9BXE9 311 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 ZBP1Q9H171 429 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 MAFBQ9Y5Q3 323 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 IRAK3Q9Y616 596 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 ZFYVE26Q68DK2 2539 aa12.24□□□□□ -0.45
CSNK1E-202ENST00000366216 F5P12259 2224 aa12.23□□□□□ -0.45
CSNK1E-202ENST00000366216 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms