RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 SURF1Q15526 300 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 VWA3BQ502W6 1294 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 ZBTB41Q5SVQ8 909 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 APTXQ7Z2E3 356 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 RBM23Q86U06 439 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 CDR2LQ86X02 465 aaPredicted RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 BRSK2Q8IWQ3 736 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 THNSL1Q8IYQ7 743 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 RDH13Q8NBN7 331 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 FEZF2Q8TBJ5 459 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 SP7Q8TDD2 431 aaPredicted RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 TMC2Q8TDI7 906 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 APBB2Q92870 758 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 CCDC127Q96BQ5 260 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 MRPL38Q96DV4 380 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 ACAP3Q96P50 834 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 YME1L1Q96TA2 773 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 APOL5Q9BWW9 433 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 XPO4Q9C0E2 1151 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 HAPLN2Q9GZV7 340 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 VPS16Q9H269 839 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 NDST4Q9H3R1 872 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 AGO3Q9H9G7 860 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 RPF1Q9H9Y2 349 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 TOPORSQ9NS56 1045 aaPredicted RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 FAM86C1Q9NVL1 165 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 HCSTQ9UBK5 93 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 CDH22Q9UJ99 828 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 CPSF3Q9UKF6 684 aaKnown RBP7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 PADI3Q9ULW8 664 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 ATG2AQ2TAZ0 1938 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 PIEZO1Q92508 2521 aa7.34□□□□□ -1.23
RNU1-55P-201ENST00000365510 TRIOO75962 3097 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 C19orf67A6NJJ6 358 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 PRR33A8MZF0 331 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 PER2O15055 1255 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MBTPS2O43462 519 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 DCXO43602 365 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 RECQL4O94761 1208 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 AFPP02771 609 aaKnown RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 TRIM49P0CI25 452 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 TRIM49CP0CI26 452 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 CXCL8P10145 99 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 CDC25BP30305 580 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 GTF2H1P32780 548 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 CTNNB1P35222 781 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 TNFSF9P41273 254 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 GRM5P41594 1212 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MXI1P50539 228 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 OSTNP61366 133 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MYL7Q01449 175 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 UBXN1Q04323 297 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 KCNH2Q12809 1159 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 ENOX2Q16206 610 aaKnown RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 PAN2Q504Q3 1202 aaKnown RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MIIPQ5JXC2 388 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 RNF135Q8IUD6 432 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 WDR49Q8IV35 697 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 CD302Q8IX05 232 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 CEP120Q8N960 986 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 ZSWIM2Q8NEG5 633 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 PRSS33Q8NF86 280 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 LINC01599Q8WXQ3 324 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 SEPT8Q92599 483 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 SLC35C1Q96A29 364 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 FAM212AQ96EL1 285 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 BORCS6Q96GS4 357 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MFSD14AQ96MC6 490 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 CGRRF1Q99675 332 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 TRAIPQ9BWF2 469 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 EIF2AQ9BY44 585 aaKnown RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MMRN2Q9H8L6 949 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 RTN4Q9NQC3 1192 aaKnown RBP7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 C1orf112Q9NSG2 853 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 FAM105AQ9NUU6 356 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 IPPQ9Y573 584 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 PCDHB2Q9Y5E7 798 aa7.33□□□□□ -1.24
RNU1-55P-201ENST00000365510 MYO10Q9HD67 2058 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 A0A1W2PQC6 194 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 GTPBP10A4D1E9 387 aaKnown RBP7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 LRRIQ3A6PVS8 624 aaPredicted RBP7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 P4HA2O15460 535 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 TBX10O75333 385 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 CLSTN1O94985 981 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 TMEM191BP0C7N4 346 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 TNNI1P19237 187 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 SP100P23497 879 aaPredicted RBP7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 BMPR1AP36894 532 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 FMO5P49326 533 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 AP3M2P53677 418 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 CCDC173Q0VFZ6 552 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 NR1I3Q14994 352 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 TMEM132DQ14C87 1099 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 SEZ6Q53EL9 994 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 UBXN11Q5T124 520 aa7.32□□□□□ -1.24
RNU1-55P-201ENST00000365510 KRT39Q6A163 491 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms