RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 COA7Q96BR5 231 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 AGAP2Q99490 1192 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 SLC13A1Q9BZW2 595 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 GSTO2Q9H4Y5 243 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 HOMER2Q9NSB8 354 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 CDHR4A6H8M9 788 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 SGTAO43765 313 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 CDKL5O76039 1030 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 GCP02774 474 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 ELANEP08246 267 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 IBSPP21815 317 aaPredicted RBP5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 FGFR4P22455 802 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 EDNRBP24530 442 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 TP53BP2Q13625 1128 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 IL10RAQ13651 578 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 ODF1Q14990 250 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 B3GNTL1Q67FW5 361 aaPredicted RBP5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 PCSK4Q6UW60 755 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 CMTR2Q8IYT2 770 aaKnown RBP5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 TMEM132CQ8N3T6 1108 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 BEND2Q8NDZ0 799 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 IFI44Q8TCB0 444 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 KAT5Q92993 513 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 RNF31Q96EP0 1072 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 ALOXE3Q9BYJ1 711 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 RNF181Q9P0P0 153 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 USP25Q9UHP3 1055 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 SERPINB13Q9UIV8 391 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
RNU6-553P-201ENST00000364047 GRM6O15303 877 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 HAUS5O94927 633 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 GPANK1O95872 356 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 FOSP01100 380 aaPredicted RBP5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 CKBP12277 381 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 USP14P54578 494 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 ADKP55263 362 aaKnown RBP5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 HSD11B2P80365 405 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 TAP1Q03518 808 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 HECTD2Q5U5R9 776 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 PPP4R3AQ6IN85 833 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 FOXR2Q6PJQ5 311 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 Q6YL49 198 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 GADL1Q6ZQY3 521 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 SUPT20HQ8NEM7 779 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 NLGN4YQ8NFZ3 816 aaPredicted RBP5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 TBC1D15Q8TC07 691 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 GPATCH3Q96I76 525 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 BRINP2Q9C0B6 783 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 C11orf21Q9P2W6 132 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 KCNE5Q9UJ90 142 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 PACSIN3Q9UKS6 424 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 SPEF1Q9Y4P9 236 aa5.41□□□□□ -1.54
RNU6-553P-201ENST00000364047 CCDC78A2IDD5 438 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 RHOBTB3O94955 611 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 ITGAMP11215 1152 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 MTHFD1P11586 935 aaKnown RBP5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 SLC6A4P31645 630 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 INHBEP58166 350 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 ZNF280AP59817 542 aaPredicted RBP5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 NOMO3P69849 1222 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 CXADRP78310 365 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 RAB39AQ14964 217 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 NOMO2Q5JPE7 1267 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 NUP133Q8WUM0 1156 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 ASB10Q8WXI3 467 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 MARS2Q96GW9 593 aaKnown RBP5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 CLPTM1LQ96KA5 538 aa5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 MTO1Q9Y2Z2 717 aaKnown RBP5.4□□□□□ -1.54
RNU6-553P-201ENST00000364047 PIPSLA2A3N6 862 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 ERN1O75460 977 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 SNUPNO95149 360 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 RPLP2P05387 115 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 CD1AP06126 327 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 SBK3P0C264 359 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 PROZP22891 400 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 RECQLP46063 649 aaPredicted RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 AVPR1BP47901 424 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 TLE1Q04724 770 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 ABHD17BQ5VST6 288 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 FAM43AQ8N2R8 423 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 MIER2Q8N344 545 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 CAVIN3Q969G5 261 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 MRGPRX4Q96LA9 322 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 PNKPQ96T60 521 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 PACSIN1Q9BY11 444 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 TOR3AQ9H497 397 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 GALNT9Q9HCQ5 603 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 TESQ9UGI8 421 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 NOP58Q9Y2X3 529 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 PCDHB1Q9Y5F3 818 aa5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 CFAP20Q9Y6A4 193 aaKnown RBP5.39□□□□□ -1.55
RNU6-553P-201ENST00000364047 COL4A3Q01955 1670 aa5.38□□□□□ -1.55
RNU6-553P-201ENST00000364047 ZRANB2O95218 330 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU6-553P-201ENST00000364047 HKR1P10072 659 aa5.38□□□□□ -1.55
RNU6-553P-201ENST00000364047 BLOC1S1P78537 153 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms