RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ABCB6Q9NP58 842 aa21.38■■□□□ 1.01
CDC42BPB-201ENST00000361246 PKP3Q9Y446 797 aa21.38■■□□□ 1.01
CDC42BPB-201ENST00000361246 MAP3K6O95382 1288 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 TTC13Q8NBP0 860 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 METTL5Q9NRN9 209 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 STK36Q9NRP7 1315 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 PROM2Q8N271 834 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 EXOC4Q96A65 974 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 TRIM55Q9BYV6 548 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 GLIS2Q9BZE0 524 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 C6orf203Q9P0P8 240 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 KDM6AO15550 1401 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 SLC25A27O95847 323 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 MBL2P11226 248 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 SPATA31E1Q6ZUB1 1445 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 TBC1D1Q86TI0 1168 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 CHSY1Q86X52 802 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 FAM136AQ96C01 138 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 GPR63Q9BZJ6 419 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 RPS6P62753 249 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 CDKL3Q8IVW4 592 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 PITPNM3Q9BZ71 974 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 PCDHB8Q9UN66 801 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 MYL4P12829 197 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 NOTUMQ6P988 496 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 CCDC90BQ9GZT6 254 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 MID2Q9UJV3 735 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 APOBEC2Q9Y235 224 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 EFTUD2Q15029 972 aaKnown RBP eCLIP21.37■■□□□ 1.016e-7■■■■■ 29.5
CDC42BPB-201ENST00000361246 MEI1Q5TIA1 1274 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 RGS9BPQ6ZS82 235 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 STOX1Q6ZVD7 989 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 C16orf86Q6ZW13 317 aa21.37■■□□□ 1.01
CDC42BPB-201ENST00000361246 ORC4O43929 436 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 TYK2P29597 1187 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 HMOX2P30519 316 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 MAPK9P45984 424 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 CLCN3P51790 818 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 MIB1Q86YT6 1006 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 B4GALNT2Q8NHY0 566 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 MAD2L2Q9UI95 211 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 CROCC2H7BZ55 1655 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 ZNF34Q8IZ26 560 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 TRMT2AQ8IZ69 625 aaKnown RBP21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 VMP1Q96GC9 406 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 NDUFS3O75489 264 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 CCDC137Q6PK04 289 aaKnown RBP21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 MXRA8Q9BRK3 442 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 TMEM39AQ9NV64 488 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 NTSR2O95665 410 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 KYAT1Q16773 422 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 C6orf118Q5T5N4 469 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 GJB7Q6PEY0 223 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 BTN2A2Q8WVV5 523 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 RABGGTAQ92696 567 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 FOPNLQ96NB1 174 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 C1orf167Q5SNV9 1468 aa21.36■■□□□ 1.01
CDC42BPB-201ENST00000361246 KPNA7A9QM74 516 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 SUPT3HB4E1H0 165 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 SUPT3HO75486 399 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 HSPA8P11142 646 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 MZF1P28698 734 aaPredicted RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 RHOT1Q8IXI2 618 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 UPF3AQ9H1J1 476 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 AAASQ9NRG9 546 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 KCNH7Q9NS40 1196 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 B3GAT3O94766 335 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 FDX1P10109 184 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 RRM2BQ7LG56 351 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 CENPKQ9BS16 269 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 TRIM15Q9C019 465 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 DDX56Q9NY93 547 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 EIF4E1BA6NMX2 242 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 POMCP01189 267 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 CCDC85BQ15834 202 aaPredicted RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 PDCD2Q16342 344 aaPredicted RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 ELMO3Q96BJ8 720 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 GPRC5CQ9NQ84 441 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 RIMS1Q86UR5 1692 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 DGAT1O75907 488 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 CD4P01730 458 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 VCAM1P19320 739 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 LY6KQ17RY6 165 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 SHC4Q6S5L8 630 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 ASAP3Q8TDY4 903 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 HPDLQ96IR7 371 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 CD274Q9NZQ7 290 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 TRAF3IP3Q9Y228 551 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 NR1D1P20393 614 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 KLK7P49862 253 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 BTKQ06187 659 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 RBBP8NLQ8NC74 664 aaPredicted RBP21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 SERPINI1Q99574 410 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 RNF19AQ9NV58 838 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 FBXL21Q9UKT6 434 aa21.35■■□□□ 1.01
CDC42BPB-201ENST00000361246 GTF2H1P32780 548 aa21.34■■□□□ 1.01
CDC42BPB-201ENST00000361246 SPARCL1Q14515 664 aa21.34■■□□□ 1.01
CDC42BPB-201ENST00000361246 NUP93Q8N1F7 819 aa21.34■■□□□ 1.01
CDC42BPB-201ENST00000361246 H0Y3Z8 333 aa21.34■■□□□ 1.01
CDC42BPB-201ENST00000361246 IZUMO3Q5VZ72 239 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms