RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SV2AQ7L0J3 742 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 URGCPQ8TCY9 931 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 SLC38A7Q9NVC3 462 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TAB2Q9NYJ8 693 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 UBQLN1Q9UMX0 589 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 INPP5FQ9Y2H2 1132 aa13.42□□□□□ -0.26
NIF3L1-201ENST00000359683 TBKBP1A7MCY6 615 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 XPOTO43592 962 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 POMCP01189 267 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 AFPP02771 609 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 ATP2A2P16615 1042 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 COPB1P53618 953 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 ZACNQ401N2 412 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 HERC6Q8IVU3 1022 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 C18orf25Q96B23 403 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 ANKRD36BP1Q96IX9 119 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 FAM84AQ96KN4 292 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 RNPC3Q96LT9 517 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 VPS16Q9H269 839 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 NDST4Q9H3R1 872 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 TMEM8AQ9HCN3 771 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 PDCD11Q14690 1871 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 FNDC1Q4ZHG4 1894 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-201ENST00000359683 COL4A6Q14031 1691 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 DDHD2O94830 711 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 TMEM191BP0C7N4 346 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 LRPAP1P30533 357 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 GCLMP48507 274 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 FMO5P49326 533 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 FANCCQ00597 558 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 DSC1Q08554 894 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 CBWD6Q4V339 395 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 CBWD3Q5JTY5 395 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 CBWD5Q5RIA9 395 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 KRT39Q6A163 491 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 TRAPPC11Q7Z392 1133 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 BEST2Q8NFU1 509 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 CXorf38Q8TB03 319 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 DPP3Q9NY33 737 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 INSL6Q9Y581 213 aa13.4□□□□□ -0.26
NIF3L1-201ENST00000359683 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 P4HA2O15460 535 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 N4BP1O75113 896 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TNNC2P02585 160 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TPM2P07951 284 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TUSC3Q13454 348 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TDRD10Q5VZ19 366 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 COLGALT2Q8IYK4 626 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 RAD9AQ99638 391 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 NRDE2Q9H7Z3 1164 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 SIX4Q9UIU6 781 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 FSD2A1L4K1 749 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 GTPBP10A4D1E9 387 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 LGALS16A8MUM7 142 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 B4GALT3O60512 393 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 SERPINC1P01008 464 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 CST3P01034 146 aaPredicted RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 MXI1P50539 228 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 GUCY2FP51841 1108 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 NR1I3Q14994 352 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 PAN2Q504Q3 1202 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 SARM1Q6SZW1 724 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 TMEM130Q8N3G9 435 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 YME1L1Q96TA2 773 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 CWH43Q9H720 699 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 MMRN2Q9H8L6 949 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 ITGA11Q9UKX5 1188 aa13.39□□□□□ -0.27
NIF3L1-201ENST00000359683 PIRO00625 290 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 VNN1O95497 513 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 UBASH3AP57075 661 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 RBP5P82980 135 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 SMAD3P84022 425 aaKnown RBP13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 BIRC3Q13489 604 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 BTG3Q14201 252 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 UROC1Q96N76 676 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 FAM193BQ96PV7 902 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms