RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ARSEP51690 589 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 RFWD2Q8NHY2 731 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 PGM2Q96G03 612 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 ECSITQ9BQ95 431 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 EURLQ9NYK6 297 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 GTSE1Q9NYZ3 720 aa6.39□□□□□ -1.39
VPS13B-203ENST00000358544 GTPBP10A4D1E9 387 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SPAG6O75602 509 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 HIBADHP31937 336 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 STK4Q13043 487 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 C1orf228Q6PIY5 440 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF555Q8NEP9 628 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 E2F7Q96AV8 911 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 FAM89AQ96GI7 184 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CELF4Q9BZC1 486 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 KLHL33A6NCF5 533 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ZSCAN5CA6NGD5 496 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ZBED4O75132 1171 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 UFL1O94874 794 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 BGNP21810 368 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 XKR9Q5GH70 373 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ERMARDQ5T6L9 678 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 POTEEQ6S8J3 1075 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 MIGA2Q7L4E1 593 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CDAN1Q8IWY9 1227 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 PUS7LQ9H0K6 701 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CNOT8Q9UFF9 292 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 USP42Q9H9J4 1324 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 HNRNPCL2B2RXH8 293 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 EIF3DO15371 548 aaKnown RBP eCLIP6.38□□□□□ -1.393e-6■■□□□ 13.7
VPS13B-203ENST00000358544 USP1O94782 785 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CCDC130P13994 396 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CDH3P22223 829 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 MAB21L3Q8N8X9 362 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 HDAC7Q8WUI4 952 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SLC13A1Q9BZW2 595 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 PAIP1Q9H074 479 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 APPL1Q9UKG1 709 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CARD8Q9Y2G2 431 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 GMEB1Q9Y692 573 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 YEATS2Q9ULM3 1422 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SAC3D1A6NKF1 404 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SFI1A8K8P3 1242 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CALB1P05937 261 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 AMPD2Q01433 879 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 LACTB2Q53H82 288 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 LUZP2Q86TE4 346 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 IL25Q9H293 177 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 STMN3Q9NZ72 180 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 IFI35P80217 286 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ROR1Q01973 937 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 RBM12BQ8IXT5 1001 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 LRRC39Q96DD0 335 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 PUS3Q9BZE2 481 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CNOT7Q9UIV1 285 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 AK5Q9Y6K8 562 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 WDR64B1ANS9 1081 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CHEK2O96017 543 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 PCDHA12Q9UN75 941 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 PJA2O43164 708 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SMNDC1O75940 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 DDHD2O94830 711 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 MFN2O95140 757 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ADD2P35612 726 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 MAPK7Q13164 816 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SLC29A2Q14542 456 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 TLK2Q86UE8 772 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF180Q9UJW8 692 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CAPN6Q9Y6Q1 641 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM49D1C9J1S8 452 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 AKAP10O43572 662 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SLC18A3Q16572 532 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 TTC13Q8NBP0 860 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SUPT20HQ8NEM7 779 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 VPS39Q96JC1 886 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SHCBP1LQ9BZQ2 653 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 FAM205CA6NFA0 338 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 FKBP6O75344 327 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 DHDDSQ86SQ9 333 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ASAP3Q8TDY4 903 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SAR1AQ9NR31 198 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 PCDHA1Q9Y5I3 950 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CACNA1AO00555 2505 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 BCORL1Q5H9F3 1711 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 POTEFA5A3E0 1075 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 VWA5AO00534 786 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 HNRNPDLO14979 420 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SERPINB9P50453 376 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CYP4A11Q02928 519 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 ANKS1AQ92625 1134 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 TIMMDC1Q9NPL8 285 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 SELENONQ9NZV5 590 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 DPPA5A6NC42 116 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 GOLGA8IPA6NC78 632 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CLK1P49759 484 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 MAPK11Q15759 364 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 MIS18BP1Q6P0N0 1132 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 TSPAN14Q8NG11 270 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CNKSR1Q969H4 720 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms