RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 EFEMP2O95967 443 aa26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 PTPROQ16827 1216 aa26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 CT47A1Q5JQC4 288 aaPredicted RBP26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 CEP135Q66GS9 1140 aa26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 KLHL10Q6JEL2 608 aa26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 POF1BQ8WVV4 589 aa26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 GAS2L1Q99501 681 aaPredicted RBP26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 CACNG4Q9UBN1 327 aa26.31■■□□□ 1.8
ALKAL1-201ENST00000358543 TRIM49BA6NDI0 452 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 PODXLO00592 558 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 PSMC2P35998 433 aaKnown RBP26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 MCCD1P59942 119 aaPredicted RBP26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 ENPEPQ07075 957 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 CAMK1Q14012 370 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 TTI2Q6NXR4 508 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 CAVIN1Q6NZI2 390 aaKnown RBP26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 WDR49Q8IV35 697 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 RABGGTAQ92696 567 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 FNBP1Q96RU3 617 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 DACH1Q9UI36 760 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 RWDD2AQ9UIY3 292 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 ADAM28Q9UKQ2 775 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 CTNND2Q9UQB3 1225 aa26.3■■□□□ 1.8
ALKAL1-201ENST00000358543 TADA2AO75478 443 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 B3GAT3O94766 335 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 DNAJB1P25685 340 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 CLDN10P78369 228 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 ADGRE1Q14246 886 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 PDE12Q6L8Q7 609 aaKnown RBP26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 RNF168Q8IYW5 571 aaPredicted RBP26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 TMC2Q8TDI7 906 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 PARD3BQ8TEW8 1205 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 MRPL38Q96DV4 380 aaKnown RBP26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 DUSP9Q99956 384 aaKnown RBP26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 INTS13Q9NVM9 706 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 DPP3Q9NY33 737 aa26.29■■□□□ 1.8
ALKAL1-201ENST00000358543 PLXNA4Q9HCM2 1894 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 F8W810 466 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 KIF4AO95239 1232 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 TFAMQ00059 246 aaKnown RBP26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 DUOXA2Q1HG44 320 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 DPCR1Q3MIW9 517 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 SASS6Q6UVJ0 657 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 CD300LGQ6UXG3 332 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 INTS8Q75QN2 995 aaKnown RBP26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 USP37Q86T82 979 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 CCDC127Q96BQ5 260 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 CEP63Q96MT8 703 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 CGRRF1Q99675 332 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 VN1R3Q9BXE9 311 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 GZF1Q9H116 711 aaPredicted RBP26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 TLR9Q9NR96 1032 aa26.28■■□□□ 1.8
ALKAL1-201ENST00000358543 TRANK1O15050 2925 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 ANO9A1A5B4 782 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 PIRO00625 290 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 SLC16A3O15427 465 aaKnown RBP26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 DLATP10515 647 aaKnown RBP26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 PAX3P23760 479 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 ELAVL2Q12926 359 aaKnown RBP26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 FUT10Q6P4F1 479 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 FILIP1Q7Z7B0 1213 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 FAM186BQ8IYM0 893 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 MYLIPQ8WY64 445 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 BORCS6Q96GS4 357 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 ANKRD36BP1Q96IX9 119 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 MTCH2Q9Y6C9 303 aa26.27■■□□□ 1.8
ALKAL1-201ENST00000358543 COL4A4P53420 1690 aaPredicted RBP26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 SF3B1O75533 1304 aaKnown RBP eCLIP26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 IKBKBO14920 756 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 FSCN2O14926 492 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 TRAPPC3O43617 180 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 LETM1O95202 739 aaPredicted RBP26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 SOD2P04179 222 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 TMEM191BP0C7N4 346 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 TNNI1P19237 187 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 ERCC5P28715 1186 aaPredicted RBP26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 GUCY2FP51841 1108 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 AP3M2P53677 418 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 STX17P56962 302 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 C9orf57Q5W0N0 161 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 VPS52Q8N1B4 723 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 C3orf58Q8NDZ4 430 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 PLEKHO2Q8TD55 490 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 POP1Q99575 1024 aaKnown RBP26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 NGRNQ9NPE2 291 aaKnown RBP26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 ITGA11Q9UKX5 1188 aa26.26■■□□□ 1.79
ALKAL1-201ENST00000358543 PTPRJQ12913 1337 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 EPB41P11171 864 aaKnown RBP26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 ERVFC1P60507 584 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 BMS1Q14692 1282 aaKnown RBP26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 NFKBIBQ15653 356 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 CSGALNACT2Q8N6G5 542 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 C1orf127Q8N9H9 656 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 OR5B17Q8NGF7 314 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 CXorf38Q8TB03 319 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 EEF2KMTQ96G04 330 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 HERC2P3Q9BVR0 1158 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 GPR62Q9BZJ7 368 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 MTMR12Q9C0I1 747 aa26.25■■□□□ 1.79
ALKAL1-201ENST00000358543 ZBP1Q9H171 429 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms