RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 RASA1P20936 1047 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PDK4Q16654 411 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 UGP2Q16851 508 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TAF2Q6P1X5 1199 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NT5DC3Q86UY8 548 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KIAA0825Q8IV33 1275 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DSEQ9UL01 958 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PEX1O43933 1283 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 IFNAR2P48551 515 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SLC5A9Q2M3M2 681 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 RWDD4Q6NW29 188 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 HM13Q8TCT9 377 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TEKT2Q9UIF3 430 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SOX13Q9UN79 622 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 BRDTQ58F21 947 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 C1orf228Q6PIY5 440 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ASAP3Q8TDY4 903 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 GLG1Q92896 1179 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NRKQ7Z2Y5 1582 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NCANO14594 1321 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KRT75O95678 551 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MCAMP43121 646 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 WDR59Q6PJI9 974 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SH3GL1Q99961 368 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ASNSD1Q9NWL6 643 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 LRRC53A6NM62 1247 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SGK1O00141 431 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ECE2O60344 883 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 RXRAP19793 462 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ACAD10Q6JQN1 1059 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 C16orf87Q6PH81 154 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 AADATQ8N5Z0 425 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NEDD1Q8NHV4 660 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NLRP4Q96MN2 994 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TSPAN18Q96SJ8 248 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 AGPAT1Q99943 283 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 CD320Q9NPF0 282 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 BAG5Q9UL15 447 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PRR23AA6NEV1 266 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 LSM8O95777 96 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SPDYE1Q8NFV5 336 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF75CPQ92670 426 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PCDH18Q9HCL0 1135 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SLC5A4Q9NY91 659 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SERPINB13Q9UIV8 391 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 BBOX1O75936 387 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 POLR2MP0CAP2 368 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MCL1Q07820 350 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 INSCQ1MX18 579 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ILDR1Q86SU0 546 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DPF2Q92785 391 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 AMNQ9BXJ7 453 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 AP1M1Q9BXS5 423 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ANKEF1Q9NU02 776 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 A0A1B0GW55 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4L2P0CJ85 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4L3P0CJ86 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4L4P0CJ87 422 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4L5P0CJ88 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4L6P0CJ89 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4L7P0CJ90 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KLRC1P26715 233 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 CASP5P51878 434 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 EXOC3L1Q86VI1 746 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 CCDC33Q8N5R6 958 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DUX4Q9UBX2 424 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SPATA31D1Q6ZQQ2 1576 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 FAM205AQ6ZU69 1335 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 POC1B-GALNT4F8VUJ3 575 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 FBLN1P23142 703 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TRMOQ9BU70 441 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 EFCAB1Q9HAE3 211 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 UBAP1Q9NZ09 502 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PIK3CDO00329 1044 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TXNDC9O14530 226 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KRT6CP48668 564 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ALDH5A1P51649 535 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DEFA1P59665 94 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DEFA3P59666 94 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 STOX1Q6ZVD7 989 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MARK2Q7KZI7 788 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MRPS26Q9BYN8 205 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGAP20Q9P2F6 1191 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SLC12A6Q9UHW9 1150 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF180Q9UJW8 692 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 AFF2P51816 1311 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PDE2AO00408 941 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DNM1LO00429 736 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ALOX15BO15296 676 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SNAP91O60641 907 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 STAM2O75886 525 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PABPC4LP0CB38 370 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 FMO5P49326 533 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MTA1Q13330 715 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 STXBP5Q5T5C0 1151 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 SNX30Q5VWJ9 437 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 HES6Q96HZ4 224 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 EML4Q9HC35 981 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGEF10LQ9HCE6 1279 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms