RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 C1orf127Q8N9H9 656 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 CXorf38Q8TB03 319 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 SNX27Q96L92 541 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 TRIM6Q9C030 488 aaPredicted RBP18.37■□□□□ 0.53
TPM1-205ENST00000357980 RNF208Q9H0X6 261 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 AGO3Q9H9G7 860 aaKnown RBP18.37■□□□□ 0.53
TPM1-205ENST00000357980 SIX4Q9UIU6 781 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 IPO7O95373 1038 aaKnown RBP18.36■□□□□ 0.53
TPM1-205ENST00000357980 ANXA13P27216 316 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 GFPT1Q06210 699 aaPredicted RBP18.36■□□□□ 0.53
TPM1-205ENST00000357980 TMEM132DQ14C87 1099 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 SLC18A3Q16572 532 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 ALKAL1Q6UXT8 129 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 NT5DC4Q86YG4 428 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 ARID3AQ99856 593 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 XYLT2Q9H1B5 865 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 NUB1Q9Y5A7 615 aa18.36■□□□□ 0.53
TPM1-205ENST00000357980 A0A087X0T9 212 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 RECQL4O94761 1208 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CCDC172P0C7W6 258 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 FAM228BP0C875 321 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 ARHGAP25P42331 645 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CDK7P50613 346 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 MYL6P60660 151 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 SPA17Q15506 151 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 ZNF618Q5T7W0 954 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 ZNF662Q6ZS27 426 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 SEZ6LQ9BYH1 1024 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 IMPG2Q9BZV3 1241 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CXCL16Q9H2A7 254 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 ERVK-5Q9HDB9 667 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 DERAQ9Y315 318 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 UMODL1Q5DID0 1318 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 GPR182O15218 404 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CKBP12277 381 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CUL2Q13617 745 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 LPIN1Q14693 890 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 SGSM1Q2NKQ1 1148 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 TWF2Q6IBS0 349 aaKnown RBP18.35■□□□□ 0.53
TPM1-205ENST00000357980 TRAF7Q6Q0C0 670 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 SMG8Q8ND04 991 aaKnown RBP18.35■□□□□ 0.53
TPM1-205ENST00000357980 JAKMIP2Q96AA8 810 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CHST12Q9NRB3 414 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 CNTN3Q9P232 1028 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 ADAMTS1Q9UHI8 967 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 IPPQ9Y573 584 aa18.35■□□□□ 0.53
TPM1-205ENST00000357980 RCCD1A6NED2 376 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 ABL1P00519 1130 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
TPM1-205ENST00000357980 YARSP54577 528 aaKnown RBP18.34■□□□□ 0.53
TPM1-205ENST00000357980 NFX1Q12986 1120 aaKnown RBP18.34■□□□□ 0.53
TPM1-205ENST00000357980 TRPC3Q13507 836 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 CTU1Q7Z7A3 348 aaKnown RBP18.34■□□□□ 0.53
TPM1-205ENST00000357980 TMEM130Q8N3G9 435 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 ZMAT2Q96NC0 199 aaKnown RBP18.34■□□□□ 0.53
TPM1-205ENST00000357980 IFIH1Q9BYX4 1025 aaKnown RBP18.34■□□□□ 0.53
TPM1-205ENST00000357980 LZTFL1Q9NQ48 299 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 PADI3Q9ULW8 664 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 NENFQ9UMX5 172 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 PCDHA13Q9Y5I0 950 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
TPM1-205ENST00000357980 GHRP10912 638 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 TNNT1P13805 278 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 ACO1P21399 889 aaKnown RBP18.33■□□□□ 0.53
TPM1-205ENST00000357980 TBXAS1P24557 533 aaPredicted RBP18.33■□□□□ 0.53
TPM1-205ENST00000357980 AKAP5P24588 427 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 CD52P31358 61 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 VAV2P52735 878 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 ZBTB6Q15916 424 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 XKR4Q5GH76 650 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 KIF12Q96FN5 646 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 RNF39Q9H2S5 420 aa18.33■□□□□ 0.53
TPM1-205ENST00000357980 CYP26A1O43174 497 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 ITGB3P05106 788 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 PAK2Q13177 524 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 BMS1Q14692 1282 aaKnown RBP18.33■□□□□ 0.52
TPM1-205ENST00000357980 FAM126BQ8IXS8 530 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 USP38Q8NB14 1042 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 SLC30A5Q8TAD4 765 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 EPS8L1Q8TE68 723 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 TAF4BQ92750 862 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 ZNF333Q96JL9 665 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.33■□□□□ 0.52
TPM1-205ENST00000357980 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 CRISPLD2Q9H0B8 497 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 NOCTQ9UK39 431 aaKnown RBP18.33■□□□□ 0.52
TPM1-205ENST00000357980 ITGA11Q9UKX5 1188 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 TFR2Q9UP52 801 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 PCDHB2Q9Y5E7 798 aa18.33■□□□□ 0.52
TPM1-205ENST00000357980 KIF2AO00139 706 aaPredicted RBP18.32■□□□□ 0.52
TPM1-205ENST00000357980 DDX3XO00571 662 aaKnown RBP eCLIP18.32■□□□□ 0.522e-8■■■■□ 19.9
TPM1-205ENST00000357980 OFD1O75665 1012 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 USP8P40818 1118 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 MNX1P50219 401 aaPredicted RBP18.32■□□□□ 0.52
TPM1-205ENST00000357980 DSC3Q14574 896 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 ZNF699Q32M78 642 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 ARHGAP29Q52LW3 1261 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 FBXO46Q6PJ61 603 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms