RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ADAM12O43184 909 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 TOM1L1O75674 476 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 LRG1P02750 347 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 KCNE1P15382 129 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 PTPN2P17706 415 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 BRCC3P46736 316 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 PSEN1P49768 467 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 ARPP19P56211 112 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 NTHL1P78549 312 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 HTR4Q13639 388 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 PABPC1LQ4VXU2 614 aaKnown RBP11.65□□□□□ -0.54
CAPN3-204ENST00000356316 HYIQ5T013 277 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 LARP1BQ659C4 914 aaKnown RBP11.65□□□□□ -0.54
CAPN3-204ENST00000356316 CWF19L1Q69YN2 538 aaKnown RBP11.65□□□□□ -0.54
CAPN3-204ENST00000356316 KCNK18Q7Z418 384 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 CCDC105Q8IYK2 499 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 DTWD2Q8NBA8 298 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 RASSF8Q8NHQ8 419 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 ZNF461Q8TAF7 563 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 GPR152Q8TDT2 470 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 FGF13Q92913 245 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 AK8Q96MA6 479 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
CAPN3-204ENST00000356316 ANKFY1Q9P2R3 1169 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 MRPS23Q9Y3D9 190 aaKnown RBP11.65□□□□□ -0.54
CAPN3-204ENST00000356316 SIT1Q9Y3P8 196 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 CITO14578 2027 aa11.65□□□□□ -0.54
CAPN3-204ENST00000356316 VWA8A3KMH1 1905 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 KRBA1A5PL33 1030 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 PROB1E7EW31 1015 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 SYN3O14994 580 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 SLC26A4O43511 780 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 KRT18P05783 430 aaKnown RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 POU2F2P09086 479 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 SCP2P22307 547 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 PROZP22891 400 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 NBL1P41271 181 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 MAPK7Q13164 816 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 NOLC1Q14978 699 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ANGPT1Q15389 498 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 KYAT1Q16773 422 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 VARS2Q5ST30 1063 aaKnown RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 PARM1Q6UWI2 310 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ZPBP2Q6X784 338 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 TAS1R3Q7RTX0 852 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ELMOD1Q8N336 334 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 APPL2Q8NEU8 664 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ST13P5Q8NFI4 369 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 NKD2Q969F2 451 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ZBTB45Q96K62 511 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 SNX27Q96L92 541 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ZMAT2Q96NC0 199 aaKnown RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 PNMA5Q96PV4 448 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 TBC1D17Q9HA65 648 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 ARHGEF3Q9NR81 526 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 CNTN3Q9P232 1028 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
CAPN3-204ENST00000356316 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-204ENST00000356316 BMP15O95972 392 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 CLTAP09496 248 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 MAPTP10636 758 aaKnown RBP11.63□□□□□ -0.55
CAPN3-204ENST00000356316 IGFBP6P24592 240 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-204ENST00000356316 MCM4P33991 863 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 GPC5P78333 572 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 PFKPQ01813 784 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 SOX4Q06945 474 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-204ENST00000356316 CTXN3Q4LDR2 81 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 SEZ6Q53EL9 994 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 SPECC1Q5M775 1068 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 CD300LGQ6UXG3 332 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-204ENST00000356316 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 FRMD5Q7Z6J6 570 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 TMEM161BQ8NDZ6 487 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 ITFG1Q8TB96 612 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 FGF14Q92915 247 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-204ENST00000356316 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 CYP4F11Q9HBI6 524 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 HCFC1R1Q9NWW0 138 aa11.63□□□□□ -0.55
CAPN3-204ENST00000356316 DNMT3BQ9UBC3 853 aaKnown RBP11.63□□□□□ -0.55
CAPN3-204ENST00000356316 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 MYO15AQ9UKN7 3530 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 ZNF197O14709 1029 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 XPOTO43592 962 aaKnown RBP11.62□□□□□ -0.55
CAPN3-204ENST00000356316 ABLIM3O94929 683 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 FAM13AO94988 1023 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 ATF2P15336 505 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 ABCD1P33897 745 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 LIG4P49917 911 aa11.62□□□□□ -0.55
CAPN3-204ENST00000356316 ROR1Q01973 937 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms