RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SGO1Q5FBB7 561 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 CDH24Q86UP0 819 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 DAPK2Q9UIK4 370 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 KLHL2O95198 593 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 CAPZA2P47755 286 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 BCAR1P56945 870 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 KYNUQ16719 465 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 PID1Q7Z2X4 250 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 ZFATQ9P243 1243 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 MTO1Q9Y2Z2 717 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 AATKQ6ZMQ8 1374 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 TTC26A0AVF1 554 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 CLDN3O15551 220 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 PHF2O75151 1096 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 SDC4P31431 198 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 SLC10A5Q5PT55 438 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 WNK4Q96J92 1243 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM118BQ9BPY3 351 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 GINS4Q9BRT9 223 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 BCS1LQ9Y276 419 aa11.58□□□□□ -0.56
GTF3C1-201ENST00000356183 LRRIQ3A6PVS8 624 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 TRADDQ15628 312 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 CHI3L2Q15782 390 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 EFHC2Q5JST6 749 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 TTC39BQ5VTQ0 682 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 TTC23LQ6PF05 361 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 P3H2Q8IVL5 708 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 DTNAQ9Y4J8 743 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 RALBP11234 206 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 GNAT1P11488 350 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 SULT1E1P49888 294 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 PTK7Q13308 1070 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 IL17REQ8NFR9 667 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 CENPTQ96BT3 561 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF668Q96K58 619 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 CD274Q9NZQ7 290 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 PSMC3IPQ9P2W1 217 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 ABCB11O95342 1321 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 TRIM13O60858 407 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 SKAP2O75563 359 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 TP53BP2Q13625 1128 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF568Q3ZCX4 644 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 ARL6IP4Q66PJ3 421 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MIER2Q8N344 545 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MDM1Q8TC05 714 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MRPL39Q9NYK5 338 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MYO3BQ8WXR4 1341 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 COX10Q12887 443 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 PROM2Q8N271 834 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 USP33Q8TEY7 942 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MPP4Q96JB8 637 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 SHCBP1LQ9BZQ2 653 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MANSC1Q9H8J5 431 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 PCDHA6Q9UN73 950 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 PCDHA8Q9Y5H6 950 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 NPHP3-ACAD11A0A0J9YXS1 232 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 NUDT2P50583 147 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 MEI1Q5TIA1 1274 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 SGSM3Q96HU1 749 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 LIMA1Q9UHB6 759 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 REREQ9P2R6 1566 aa11.57□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM47DPA6NHR8 397 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 STAT3P40763 770 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 USP10Q14694 798 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 COG2Q14746 738 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 C16orf72Q14CZ0 275 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 CHMP1BQ7LBR1 199 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 SLC35G2Q8TBE7 412 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 TMEM260Q9NX78 707 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 ARHGEF37A1IGU5 675 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 hCG_1984214I3L0E3 225 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 FAM107AO95990 144 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 PRELPP51888 382 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 SEC24CP53992 1094 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF200P98182 395 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 LAMC2Q13753 1193 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 BYSLQ13895 437 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 SYTL3Q4VX76 610 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 C11orf96Q7Z7L8 435 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 ZNF713Q8N859 430 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 PCYOX1LQ8NBM8 494 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 KLF6Q99612 283 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 PDP2Q9P2J9 529 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 KNOP1Q1ED39 458 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 AGBL2Q5U5Z8 902 aa11.56□□□□□ -0.56
GTF3C1-201ENST00000356183 PI16Q6UXB8 463 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms