RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCNB1P14635 433 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ATP5DP30049 168 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 POLGP54098 1239 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 HADHBP55084 474 aaKnown RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 NOP14P78316 857 aaKnown RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 IL9RQ01113 521 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 NBPF20Q3BBV1 942 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 XXYLT1Q8NBI6 393 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 NACC1Q96RE7 527 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 DENND2DQ9H6A0 471 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 RNPEPL1Q9HAU8 725 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 UBN1Q9NPG3 1134 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 CYP1A2P05177 515 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 TPBGLP0DKB5 382 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 TCF4P15884 667 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ATP4AP20648 1035 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 CIITAP33076 1130 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 MAGEA4P43358 317 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 TAS2R40P59535 323 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■■■■■ 34.9
PTPRA-203ENST00000356147 PCNX4Q63HM2 1172 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 UCMAQ8WVF2 138 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 C7orf43Q8WVR3 580 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 TEKT1Q969V4 418 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 MKL1Q969V6 931 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 SLC7A6OSQ96CW6 309 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 PRR11Q96HE9 360 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 GTF3C4Q9UKN8 822 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 FOSP01100 380 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-203ENST00000356147 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
PTPRA-203ENST00000356147 GAD2Q05329 585 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 CLUL1Q15846 466 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 RNF43Q68DV7 783 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.69
PTPRA-203ENST00000356147 ACER1Q8TDN7 264 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 TRAIPQ9BWF2 469 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 PPP1R12CQ9BZL4 782 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 TRABDQ9H4I3 376 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 KIAA1586Q9HCI6 787 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 TUFT1Q9NNX1 390 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 TXLNGQ9NUQ3 528 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 ADAMTSL1Q8N6G6 1762 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 IFNB1P01574 187 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
PTPRA-203ENST00000356147 GNAZP19086 355 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 CALB2P22676 271 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 CRKP46108 304 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 SLC15A2Q16348 729 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 ABCB5Q2M3G0 1257 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 SYCP2LQ5T4T6 812 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 PLA2G4FQ68DD2 849 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 HAUS6Q7Z4H7 955 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 ZNF622Q969S3 477 aaKnown RBP eCLIP10.77□□□□□ -0.695e-6■■□□□ 11.7
PTPRA-203ENST00000356147 C11orf70Q9BRQ4 267 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 SPATS2LQ9NUQ6 558 aaKnown RBP10.77□□□□□ -0.69
PTPRA-203ENST00000356147 FBXO28Q9NVF7 368 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 PCNTO95613 3336 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 MROH7Q68CQ1 1323 aa10.77□□□□□ -0.69
PTPRA-203ENST00000356147 COL14A1Q05707 1796 aaKnown RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 IPO5O00410 1097 aaKnown RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 ASMTLO95671 621 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 PLS3P13797 630 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 GCAP28676 217 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 INHBEP58166 350 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 SARNPP82979 210 aaKnown RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 MXRA7P84157 204 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 CDR2Q01850 454 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 PTK6Q13882 451 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 KHDC1Q4VXA5 237 aaKnown RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 DSTYKQ6XUX3 929 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 C15orf52Q6ZUT6 534 aaKnown RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 LRRC8CQ8TDW0 803 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 STK32AQ8WU08 396 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 MAML1Q92585 1016 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 RBM17Q96I25 401 aaKnown RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 RAB3IPQ96QF0 476 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 CYP39A1Q9NYL5 469 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 CORO1CQ9ULV4 474 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 A0A0G2JND7 137 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 SORBS3O60504 671 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 SMIM24O75264 130 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 RFC5P40937 340 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 PIK3CAP42336 1068 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 IRX1P78414 480 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 CEP55Q53EZ4 464 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 RNF220Q5VTB9 566 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 SPOPLQ6IQ16 392 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 C12orf50Q8NA57 414 aaPredicted RBP10.76□□□□□ -0.69
PTPRA-203ENST00000356147 ATL2Q8NHH9 583 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 CCDC17Q96LX7 622 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 DLGAP2Q9P1A6 1054 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 TAF1LQ8IZX4 1826 aa10.76□□□□□ -0.69
PTPRA-203ENST00000356147 CFAP69A5D8W1 941 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms