RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
RTN3-205ENST00000356000 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 BAG2O95816 211 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 RARBP10826 455 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ASIC1P78348 528 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 FUT2Q10981 343 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ALX1Q15699 326 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 CYFIP1Q7L576 1253 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 OTOAQ7RTW8 1153 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ATAD3AQ9NVI7 634 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 PLK2Q9NYY3 685 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 C15orf38-AP3S2A0A0A6YYH1 394 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 PP2D1A8MPX8 630 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 USP1O94782 785 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 KRT13P13646 458 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ADD2P35612 726 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ACTR3P61158 418 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 DLG1Q12959 904 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 SCARF1Q14162 830 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 SPARCL1Q14515 664 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ARPINQ7Z6K5 226 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
RTN3-205ENST00000356000 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 PLIN2Q99541 437 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 NEURL2Q9BR09 285 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 HGH1Q9BTY7 390 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 LRRC27Q9C0I9 530 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
RTN3-205ENST00000356000 GOLGA8TH3BQL2 631 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 UBA7P41226 1012 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 EPS15P42566 896 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 PLEKHG4Q58EX7 1191 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ZNF280DQ6N043 979 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 RFX8Q6ZV50 586 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 IRF2BP2Q7Z5L9 587 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 DNAAF5Q86Y56 855 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ANKK1Q8NFD2 765 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 STARD8Q92502 1023 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 FAM161BQ96MY7 647 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 CYTH2Q99418 400 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 ZKSCAN3Q9BRR0 538 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 AAASQ9NRG9 546 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 SCHIP1Q9P0W5 487 aaPredicted RBP16.66■□□□□ 0.26
RTN3-205ENST00000356000 KANSL3Q9P2N6 904 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 COQ6Q9Y2Z9 468 aa16.66■□□□□ 0.26
RTN3-205ENST00000356000 RASA4BC9J798 803 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 EYA2O00167 538 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 RASA4O43374 803 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 CYP2C9P11712 490 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 TMEM214Q6NUQ4 689 aaKnown RBP16.65■□□□□ 0.26
RTN3-205ENST00000356000 RIPOR1Q6ZS17 1223 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 PYROXD1Q8WU10 500 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.26
RTN3-205ENST00000356000 THEGQ9P2T0 379 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 UVRAGQ9P2Y5 699 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 MEGF6O75095 1541 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 hCG_1642624A0A1W2PR95 340 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 ANKRD63C9JTQ0 380 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 CDH16O75309 829 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 TTC4O95801 387 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 CETPP11597 493 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 FOXO4P98177 505 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 MMEL1Q495T6 779 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 ERI1Q8IV48 349 aaKnown RBP16.65■□□□□ 0.26
RTN3-205ENST00000356000 HPS3Q969F9 1004 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 CDK5RAP3Q96JB5 506 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 PANX3Q96QZ0 392 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 MRPS26Q9BYN8 205 aaKnown RBP16.65■□□□□ 0.26
RTN3-205ENST00000356000 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
RTN3-205ENST00000356000 ITM2BQ9Y287 266 aa16.65■□□□□ 0.26
RTN3-205ENST00000356000 A0A087WZG4 1122 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 DNAJC6O75061 913 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 FKBP6O75344 327 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 H2AFZP0C0S5 128 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 HSPA6P17066 643 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 CETN2P41208 172 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 BCAP31P51572 246 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 SLC18A1P54219 525 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 C6orf183Q5T699 404 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 C6orf163Q5TEZ5 329 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 DTHD1Q6ZMT9 781 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 H2AFVQ71UI9 128 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 FAM172AQ8WUF8 416 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 GANQ9H2C0 597 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 GRID1Q9ULK0 1009 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 AK5Q9Y6K8 562 aa16.64■□□□□ 0.25
RTN3-205ENST00000356000 V9GY48 417 aaPredicted RBP16.64■□□□□ 0.25
RTN3-205ENST00000356000 ESRRAP11474 423 aaPredicted RBP16.64■□□□□ 0.25
RTN3-205ENST00000356000 FYB2Q5VWT5 728 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms