RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 BMP8AQ7Z5Y6 402 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 MAP4K3Q8IVH8 894 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 DDX12PQ92771 950 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 STAMQ92783 540 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 BICD1Q96G01 975 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 CHAMP1Q96JM3 812 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 UROC1Q96N76 676 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 PRKD2Q9BZL6 878 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 PLEKHA4Q9H4M7 779 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 HCFC1R1Q9NWW0 138 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 TBC1D7Q9P0N9 293 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 SORCS3Q9UPU3 1222 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 HCN4Q9Y3Q4 1203 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 CDY1Q9Y6F8 540 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 A0A0B4J269 797 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 NARSO43776 548 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 LIG4P49917 911 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 RAB33AQ14088 237 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 VARS2Q5ST30 1063 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 SCARA3Q6AZY7 606 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 APBB1IPQ7Z5R6 666 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 PRSS33Q8NF86 280 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 PBXIP1Q96AQ6 731 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 STRA6Q9BX79 667 aa18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-201ENST00000355572 WDR27A2RRH5 827 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 HNRNPDLO14979 420 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 CCL16O15467 120 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 C8AP07357 584 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 ADRB2P07550 413 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.515e-11■■■□□ 18.9
PDLIM7-201ENST00000355572 ELAVL2Q12926 359 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 MRPL58Q14197 206 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 GRASPQ7Z6J2 395 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 PDILTQ8N807 584 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 GLIS3Q8NEA6 775 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 SLC7A14Q8TBB6 771 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 FAM84AQ96KN4 292 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 ZSCAN16Q9H4T2 348 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 ZDHHC7Q9NXF8 308 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 STK17AQ9UEE5 414 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 CPSF3Q9UKF6 684 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 MUC6Q6W4X9 2439 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 ZDBF2Q9HCK1 2354 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 WDFY4Q6ZS81 3184 aa18.24■□□□□ 0.51
PDLIM7-201ENST00000355572 OGTO15294 1046 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 TBCAO75347 108 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 SEC24AO95486 1093 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 C1RP00736 705 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 NFICP08651 508 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 CLTAP09496 248 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 ADSSP30520 456 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 GBP2P32456 591 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 ACOT2P49753 483 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 ROR1Q01973 937 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 E2F4Q16254 413 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 CRELD2Q6UXH1 353 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 GET4Q7L5D6 327 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 ZNF720Q7Z2F6 126 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 KRI1Q8N9T8 703 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 KIF12Q96FN5 646 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 KCNK12Q9HB15 430 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 BACE2Q9Y5Z0 518 aa18.23■□□□□ 0.51
PDLIM7-201ENST00000355572 SPTLC1O15269 473 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 VNN2O95498 520 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 LRPAP1P30533 357 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 CREMQ03060 361 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 MTMR3Q13615 1198 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 JADE1Q6IE81 842 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 SHC4Q6S5L8 630 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 OTOP3Q7RTS5 596 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 FBXL6Q8N531 539 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 ITFG1Q8TB96 612 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 HPS3Q969F9 1004 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 RPP25Q9BUL9 199 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 ST6GALNAC4Q9H4F1 302 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 PIDD1Q9HB75 910 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 DNMT3BQ9UBC3 853 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 CCDC39Q9UFE4 941 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 STYXL1Q9Y6J8 313 aa18.22■□□□□ 0.51
PDLIM7-201ENST00000355572 FRMD3A2A2Y4 597 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 H0YCG3 227 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 RPL9P32969 192 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 MCM4P33991 863 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 STK38Q15208 465 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 PPM1LQ5SGD2 360 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 SLC8B1Q6J4K2 584 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 PLCD3Q8N3E9 789 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms