RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 HOMEZQ8IX15 550 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZNF483Q8TF39 744 aaPredicted RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 LAMC1P11047 1609 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 MYL2P10916 166 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 KLRC1P26715 233 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 POLD1P28340 1107 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZNF786Q8N393 782 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 NMD3Q96D46 503 aaKnown RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 TRAPPC9Q96Q05 1148 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 PARVBQ9HBI1 364 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 HACD3Q9P035 362 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM153AQ9UHL3 310 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 CSADQ9Y600 493 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 CYP26A1O43174 497 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 CIITAP33076 1130 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 ATP6V1E1P36543 226 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 MAPK7Q13164 816 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 EDRF1Q3B7T1 1238 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 CNDP1Q96KN2 507 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 SENP7Q9BQF6 1050 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 M0QYV0 167 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 TRMT5Q32P41 509 aaKnown RBP13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
SYNCRIP-201ENST00000355238 ERVV-1B6SEH8 477 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 SLC16A4O15374 487 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 MYO1DO94832 1006 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 CHI3L2Q15782 390 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 RBBP7Q16576 425 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 USPL1Q5W0Q7 1092 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 CC2D2BQ6DHV5 1058 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 IZUMO2Q6UXV1 221 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 STOX1Q6ZVD7 989 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 NDUFAF2Q8N183 169 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 FRMD8Q9BZ67 464 aaPredicted RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 LBRQ14739 615 aaKnown RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 INPP5DQ92835 1189 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 PHF20Q9BVI0 1012 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 TBC1D22BQ9NU19 505 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 DENND3A2RUS2 1198 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 KCNN4O15554 427 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 CAND2O75155 1236 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 RNF135Q8IUD6 432 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZNF507Q8TCN5 953 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 USP1O94782 785 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ERVK-24P63145 666 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 IRGCQ6NXR0 463 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 PPP1R36Q96LQ0 422 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 NSMCE4AQ9NXX6 385 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 SESN1Q9Y6P5 492 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 LZTS3O60299 673 aaPredicted RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 SKAP2O75563 359 aaPredicted RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 RARGP13631 454 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 CDK17Q00537 523 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 EFHC2Q5JST6 749 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
SYNCRIP-201ENST00000355238 CCDC78A2IDD5 438 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 ZSCAN9O15535 394 aaPredicted RBP13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 COMTP21964 271 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 HMOX2P30519 316 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 GPC3P51654 580 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 KBTBD12Q3ZCT8 623 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 GPD1LQ8N335 351 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 TNIP2Q8NFZ5 429 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 TSPAN17Q96FV3 270 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 FUCA2Q9BTY2 467 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 PLAGL2Q9UPG8 496 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 ALG6Q9Y672 507 aa13.33□□□□□ -0.27
SYNCRIP-201ENST00000355238 A8MXQ7 604 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 SPRP35270 261 aaPredicted RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCNMA1Q12791 1236 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 STX5Q13190 355 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 PIGHQ14442 188 aaPredicted RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZFRQ96KR1 1074 aaKnown RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 NR1H4Q96RI1 486 aaPredicted RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 PAK5Q9P286 719 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 E5RI56 91 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 P4HBP07237 508 aaKnown RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 NFKBIAP25963 317 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms