RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 CNOT3O75175 753 aaKnown RBP8.42□□□□□ -1.06
SCN8A-201ENST00000354534 ASMTLO95671 621 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 NCAPHQ15003 741 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 LRRC41Q15345 812 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 LRRC24Q50LG9 513 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 WNK4Q96J92 1243 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC28BQ9BUN5 200 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 RPF1Q9H9Y2 349 aaKnown RBP8.42□□□□□ -1.06
SCN8A-201ENST00000354534 GGA1Q9UJY5 639 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 A0A1W2PQ27 194 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 A0A1W2PQ64 194 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 A0A1W2PQD8 194 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 TCP10L2B9ZVM9 353 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 EYA2O00167 538 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 EIF3HO15372 352 aaKnown RBP eCLIP8.42□□□□□ -1.06
SCN8A-201ENST00000354534 AHCYL1O43865 530 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 SNX4O95219 450 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 ECDO95905 644 aaPredicted RBP8.42□□□□□ -1.06
SCN8A-201ENST00000354534 HSPA13P48723 471 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 RAB2AP61019 212 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 HEATR6Q6AI08 1181 aaKnown RBP8.42□□□□□ -1.06
SCN8A-201ENST00000354534 NEK5Q6P3R8 708 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 UTS2BQ765I0 119 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 SPATA16Q9BXB7 569 aa8.42□□□□□ -1.06
SCN8A-201ENST00000354534 IFNA14P01570 189 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 VHLP40337 213 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 RFX3P48380 749 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 EXOSC10Q01780 885 aaKnown RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CHURC1Q8WUH1 139 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 SNF8Q96H20 258 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 TMEM138Q9NPI0 162 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 PRKAG2Q9UGJ0 569 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 MARK3P27448 753 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CAMK1Q14012 370 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC80Q76M96 950 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 SAMD3Q8N6K7 520 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 COQ6Q9Y2Z9 468 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 KIF24Q5T7B8 1368 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 MED26O95402 600 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 POU1F1P28069 291 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 GSTA3Q16772 222 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ERMARDQ5T6L9 678 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 LEMD2Q8NC56 503 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 NACC1Q96RE7 527 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CYLDQ9NQC7 956 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 MAN1C1Q9NR34 630 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 MEI4A8MW99 385 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CHP2O43745 196 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ATF4P18848 351 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CHI3L1P36222 383 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ROR1Q01973 937 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 PABPC4Q13310 644 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 LPCAT2Q7L5N7 544 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 EHD3Q9NZN3 535 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ADGBQ8N7X0 1667 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 GNAT1P11488 350 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ITGA6P23229 1130 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 OTOAQ7RTW8 1153 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 PGBD4Q96DM1 585 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC188H7C350 402 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 TRAPPC3LQ5T215 181 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 MIS18BP1Q6P0N0 1132 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 SLC44A2Q8IWA5 706 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 KIF2BQ8N4N8 673 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 DHTKD1Q96HY7 919 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 RBM41Q96IZ5 413 aaKnown RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ATPIF1Q9UII2 106 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 HMGXB3Q12766 1538 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 SSNA1O43805 119 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CRYMQ14894 314 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF577Q9BSK1 485 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CHID1Q9BWS9 393 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ROGDIQ9GZN7 287 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 EMC3Q9P0I2 261 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 URB2Q14146 1524 aaKnown RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 EXTL3O43909 919 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CDC16Q13042 620 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 DDB1Q16531 1140 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 PHKG1Q16816 387 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 PRUNE1Q86TP1 453 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 TTC13Q8NBP0 860 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF473Q8WTR7 871 aaKnown RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 C12orf4Q9NQ89 552 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 PDP2Q9P2J9 529 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 HUS1O60921 280 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 AP1S1P61966 158 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 THEM5Q8N1Q8 247 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 KBTBD3Q8NAB2 608 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 TAF1DQ9H5J8 278 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-201ENST00000354534 CD274Q9NZQ7 290 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 TRIM17Q9Y577 477 aa8.41□□□□□ -1.06
SCN8A-201ENST00000354534 YTHDC2Q9H6S0 1430 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms